Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01709 ATGGCGGCGTCAAAGGAAGAGGAAGAGGAAGGGAGGCAAACGACGTCATCTTCGACACCGCTTTCTCATTCGCGGTCGTTGTCTTCGTCGTCGTCGTCTTCCGATGAGAAAGAGTACGAGGTGCAGGACCTGCGGGACCGATTGAAATCTTCGAGAGGGAGCCGGTTCAATCTGATAGAGAATGAGTTGGAACTCAACTCAAGATGGAGCAAGTTCAGTCGCCAAGCTCTTTTCCATGGAATCTGTGGCTTCTCCGAGGACTTCGTCATTCATCCTGATAACAGAGACAGCCAGACCTATCGTATGGTCTACAAGCGAACACCTATAGCTCTGCGATTATACCGGGTGCGGAAAGTCACAGATTTTTTCCACAAGTTGGAGAAGGACATACGTGTCAATTACATTACTACCAGGATTGTGAAACTGATAGTAGTCGAACTCTACTGCACCCATACAGCAGCCTGCATTTTCTACTTTTTGGCTACTACTCTACCGGAATCACAAGAAGGGTACACATGGATAGGAAGTTTAAAATTGGGTGACTATAGTTATTCGCATTTCAGAGAAATTGATCTTTGGAAGCGCTACACAACATCTCTGTATTTCGCTATTGTTACTATGGCAACAGTTGGCTATGGAGATATACATGCAGTAAATTTGAGGGAGATGATATTCATAATGATATACGTTTCATTTGATATGATTCTCGGTGCCTATTTGATTGGTAACATGACAGCTTTGATAGTCAAGGGGTCAAAGACTGAAAAGTTTAGAGACAAGATGACAGACCTATTGAAATATATGAACAGAAATAAGCTTGGAAGGGATATCCGTGAACAAATTAAGGGCCATGTACGCTTACAGTATGAGAGTAGCTACACTGAGGCTGCTGTCATTCAGGATATCCCTATTTCTATTCGAGCTAAGATATCCCAAACATTATACTTGCCATACATCGAAAATGTTTCTCTTTTTAAAGGATGCTCTGCAGAATTCATCAACCAGATTGTTATTAGGATCCATGAGGAGTTCTTTCTTCCAGGGGAAGTTATAATGCAACAAGGAAATGTTGTAGATCAACTATATTTTGTCTGTCATGGAGTGCTGGAGGAAGTAGGTACAGCTGAAGATGGATCAGAAGAAACTGTTTCACTTCTGCAGCGTCACAGTTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAACCATATACTGTCCGAGTTTGTGAACTGTGTAGACTCTTGCGACTTGATAAACAATCATTTACAAATATCCTAGACATATACTTTTATGATGGAAGGAAAGTATTAAACAACCTTCTAGAGGGAAAAGAGTCTTTTCGAGGTAAGCAGTTGGAGTCAGACATCACACTTCATATTGGAAAACAAGAAGCTGAGCTTGCTTTGAAGGTCAATAGTGCAGCTTTTCATGGGGATCTACATCAGCTCAAAGGCTTAATTCGAGCTGGGGCTGATCCCAACAAAACAGATTATGATGGAAGGTCACCACTGCATCTTGCAGCGTCCAGAGGACATGAAGATATCACATTTTTCCTTATTCAAGAACGTGTAGATGTCAATATTAAAGATAACTTCGGCAACACGCCCTTACTTGAAGCAGTTAAGAATGGAAATGATCGGGTTGCTTCTTTACTTGTTAAAGAAGGGGCCTCCATGAAGATCGAAAATGCTGGTAGTTTTTTGTGTACAGCAGTTGCAAGGGGAGATTCAGATTATCTTAGAAGACTTTTATCCAATGGCATGGATCCTAACTTAAAAGATTATGATTACCGAAGCCCTCTTCACTTAGCTGCAGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTAGAAGCAGGAGCTAGTGTTTTTACCAAAGACAGATGGGGAAATACCCCGCTTGATGAAGCCCGGATGTGTGGAAATAAGAATCTGATCAAGTTGCTTGAAGATGCAAAATCTGCTCAACTGTTAGAATTCCCGTATTCCTCCCAAGAATTTACAGATAAAATGCACCCAAAGAAGTGCACAGTCTTCCCTTTCCACCCGTGGGATCCGAAAGATAATAGAAGACATGGAATTGTACTATGGATTCCACACTCCATCGAAGAGCTAATCAAATCAGCGGCAGAACTAATAGAATTTTCTGGGGATTCTTGTATTTTATCAGAAGATGGTGGTAAAATTACTGATGTGGACATGATTAAGGATGGTCAGAAGCTGTACTTAGTCCATGAAACACATTAA 2250 0.4116 MAASKEEEEEGRQTTSSSTPLSHSRSLSSSSSSSDEKEYEVQDLRDRLKSSRGSRFNLIENELELNSRWSKFSRQALFHGICGFSEDFVIHPDNRDSQTYRMVYKRTPIALRLYRVRKVTDFFHKLEKDIRVNYITTRIVKLIVVELYCTHTAACIFYFLATTLPESQEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLLKYMNRNKLGRDIREQIKGHVRLQYESSYTEAAVIQDIPISIRAKISQTLYLPYIENVSLFKGCSAEFINQIVIRIHEEFFLPGEVIMQQGNVVDQLYFVCHGVLEEVGTAEDGSEETVSLLQRHSSFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTNILDIYFYDGRKVLNNLLEGKESFRGKQLESDITLHIGKQEAELALKVNSAAFHGDLHQLKGLIRAGADPNKTDYDGRSPLHLAASRGHEDITFFLIQERVDVNIKDNFGNTPLLEAVKNGNDRVASLLVKEGASMKIENAGSFLCTAVARGDSDYLRRLLSNGMDPNLKDYDYRSPLHLAAAEGLYFMAKLLLEAGASVFTKDRWGNTPLDEARMCGNKNLIKLLEDAKSAQLLEFPYSSQEFTDKMHPKKCTVFPFHPWDPKDNRRHGIVLWIPHSIEELIKSAAELIEFSGDSCILSEDGGKITDVDMIKDGQKLYLVHETH 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01709 749 Pfam KHA, dimerisation domain of potassium ion channel 675 744 IPR021789 -
Vian7g01709 749 SUPERFAMILY Voltage-gated potassium channels 111 285 - -
Vian7g01709 749 SUPERFAMILY Ankyrin repeat 473 652 IPR036770 -
Vian7g01709 749 FunFam Gated outwardly-rectifying K+ channel 539 665 - -
Vian7g01709 749 ProSiteProfiles Ankyrin repeat region circular profile. 500 532 - -
Vian7g01709 749 PANTHER POTASSIUM CHANNEL AKT1 110 746 IPR045319 GO:0005249|GO:0006813
Vian7g01709 749 ProSiteProfiles Ankyrin repeat region circular profile. 533 564 - -
Vian7g01709 749 SUPERFAMILY cAMP-binding domain-like 252 441 IPR018490 -
Vian7g01709 749 ProSiteProfiles Ankyrin repeat profile. 564 596 IPR002110 GO:0005515
Vian7g01709 749 SMART ANK_2a 630 659 IPR002110 GO:0005515
Vian7g01709 749 SMART ANK_2a 465 496 IPR002110 GO:0005515
Vian7g01709 749 SMART ANK_2a 564 593 IPR002110 GO:0005515
Vian7g01709 749 SMART ANK_2a 500 529 IPR002110 GO:0005515
Vian7g01709 749 SMART ANK_2a 597 626 IPR002110 GO:0005515
Vian7g01709 749 SMART ANK_2a 533 562 IPR002110 GO:0005515
Vian7g01709 749 CDD CAP_ED 324 438 IPR000595 -
Vian7g01709 749 Gene3D - 458 564 IPR036770 -
Vian7g01709 749 ProSiteProfiles Ankyrin repeat region circular profile. 597 629 - -
Vian7g01709 749 ProSiteProfiles cAMP/cGMP binding motif profile. 324 444 IPR000595 -
Vian7g01709 749 ProSiteProfiles Ankyrin repeat profile. 597 629 IPR002110 GO:0005515
Vian7g01709 749 Pfam Cyclic nucleotide-binding domain 344 428 IPR000595 -
Vian7g01709 749 Gene3D Jelly Rolls 308 445 IPR014710 -
Vian7g01709 749 ProSiteProfiles Ankyrin repeat profile. 533 565 IPR002110 GO:0005515
Vian7g01709 749 Pfam Ankyrin repeats (3 copies) 570 650 IPR002110 GO:0005515
Vian7g01709 749 Pfam Ankyrin repeats (3 copies) 475 563 IPR002110 GO:0005515
Vian7g01709 749 FunFam Potassium channel KAT2 312 449 - -
Vian7g01709 749 Gene3D Helix hairpin bin 251 307 - -
Vian7g01709 749 Gene3D - 81 250 - -
Vian7g01709 749 MobiDBLite consensus disorder prediction 14 35 - -
Vian7g01709 749 ProSiteProfiles KHA domain profile. 676 749 IPR021789 -
Vian7g01709 749 SMART cnmp_10 324 442 IPR000595 -
Vian7g01709 749 Gene3D - 565 659 IPR036770 -
Vian7g01709 749 ProSiteProfiles Ankyrin repeat profile. 500 532 IPR002110 GO:0005515
Vian7g01709 749 PRINTS Ankyrin repeat signature 501 516 IPR002110 GO:0005515
Vian7g01709 749 PRINTS Ankyrin repeat signature 613 627 IPR002110 GO:0005515
Vian7g01709 749 MobiDBLite consensus disorder prediction 1 45 - -
Vian7g01709 749 Pfam Ion transport protein 110 249 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01709 Vian-Chr7 26806768 26822878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01709 543 650 Ion Channels AT5G37500 31.884 4.27e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01709 K21867 - gmx:100814385 1263.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01709 7 26806768 26822878 Vian7g01709 7 26806768 26822878 ECH