Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01680 ATGAACACTGTTATCTGCCACCGCCTAAGGCTAAGTGCAAAACTTCTTCTCTATTCTTTCCCCAAACCCTCTTTCTTGTTCTCAACAACTACTTCCGATTCTGTCTCCTTCACACCAGAGGTTGCACTGAAACTATCCAAACGACTTCGTTTCAACACCGCCCAAAAACCCGATTCCGTCATCTCCTTCTTCCAAACCCACGGTTTCTCCGCCCCCCAGATCCACCGCATCCTCAGCAAATGCCCCGAACTCATAGCGTTTCTGCATCCGGCGTCGTTTCCATTGTCACTAGGAACCCCCGATTCCTCTGTCGCAGCCTCGAAAACTGCATCTTCCCCACCTTCCAACTCCTCCGAAGGTTCTTTCCCTCCGACCTCAGAGCTCTCGCTGTTTTCTTCACCTGTCATCGGCAACTGTCACTTGGCATCAAACGTTGAAAGGTTGCTCGACGCCGGAGTCGCGCACGTCGGCATTCGGCACTTGCTCTCCTCTCGGTCTTTTGTTCTCTGCTCCAACCTGAGAACCCTTGTGGAGGAAGTGAAGCTGTTGGGGTTTGACCCTCTGAAGGTGACCTTCGCTGTGGCCCTTGAGGCCAAAAGTACAGTTTCGAAACCCCTTTGGGATGCCAAAGTCGACGTGTTGAAGAAATGGGGTTGGTCCGAGGATGAGGTTTTGGTTGCGTTTAGGAAACAGCCTAAAATGATGCACTGTTCCATGGAGAAACTTGATGCAGTGATGGGGTTTTGGGTGGGTCGGCTTGGATGGGATCGTTCTACGCTTATTGCGTACCCTTCGTTGTTTTTGTTCAGTTTGGAGAAAAGAGCTTTGGTTCTGCAGCAGCTTCTCTCCAGAGGATTGGTGAAGAAGGATGCTAGCTTCGTCACACCGTTTGTAAAGTCTGATGAGGGGTTTCTGAAAAAGTATGTGAGATCTTTCACGGAGGAAACACCCTGGTTACTAGAGCTATATCAGAAGGGACAGGGAGCATCCTAG 993 0.5035 MNTVICHRLRLSAKLLLYSFPKPSFLFSTTTSDSVSFTPEVALKLSKRLRFNTAQKPDSVISFFQTHGFSAPQIHRILSKCPELIAFLHPASFPLSLGTPDSSVAASKTASSPPSNSSEGSFPPTSELSLFSSPVIGNCHLASNVERLLDAGVAHVGIRHLLSSRSFVLCSNLRTLVEEVKLLGFDPLKVTFAVALEAKSTVSKPLWDAKVDVLKKWGWSEDEVLVAFRKQPKMMHCSMEKLDAVMGFWVGRLGWDRSTLIAYPSLFLFSLEKRALVLQQLLSRGLVKKDASFVTPFVKSDEGFLKKYVRSFTEETPWLLELYQKGQGAS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01680 330 Pfam mTERF 209 304 IPR003690 GO:0003690|GO:0006355
Vian7g01680 330 MobiDBLite consensus disorder prediction 104 125 - -
Vian7g01680 330 Gene3D Transcription termination factor 3, mitochondrial 125 316 IPR038538 -
Vian7g01680 330 Gene3D Transcription termination factor 3, mitochondrial 34 101 IPR038538 -
Vian7g01680 330 PANTHER CGI-12 PROTEIN-RELATED 29 311 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01680 Vian-Chr7 26352322 26353369 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian7g01680 mTERF 3.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01680 K15032 - var:108336607 469.544