Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01677 ATGATGAGTTTCTGTTCTGATCACACCAAGGGTGTTTCCAATGAACATGTTTCCTCTGCAGTTGGAAATGACTCTTCTGAGAACAAAAGGCTCAAATTCATGGCCTTTTTGAGAAAAACCATGTGGAACTTTGCCTTGGCGTGTGTTGGTGTTGGTCCTTGTGGTGGCCGCAACGACCATAACGGTCAAAGGAAGACAGCTTCGGAGCATAACAAGGCGTGGTTGCTGGCGGAGTCTGGAGCAGAATTGGCTACTGCTGACCCTCAATCGGTTCACTCATCTTTCAGGTTCAGTTTCTGCTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTCTTCTGCTTCTGCTGCTGCCGCTGCAACCTTTTTGATGGTAAATTTGGAATGTGAATCTCAAGTTAAGGAGATGAAATGGAGAATACATTCGCTGGAGAAAAGCATGTCTCCAGTCTTCAACCCTCTGATCAGGTTCAGCTATGATGAAATTCTGTCAGCCACTCACAATTTCTCCAAAGGGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTATAGAGGAAGAGTTGGGTTTTGGAGAACTGCTGTTGCTATTAAAAGGTTGGACAAGGAAGACAAGGAGTGTGCTAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTTCATAACACAAATGTTGTTCCTCTTGTGGGGTTTTGTATTGACTCAGAAGAGGGTTTGTTTTTGGTATACAAGTATGTGTCTGGGGGCAGCTTAGAGCATCACTTGCATGGGAAGAAGAAAAATGTGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGATATCAAGTTGCAATTGGGATTGCAGAAGCCGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCAAACATTCTGCTCTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGATTAGCTTCATGGACTTCTGCCCCATCAGTTCCTTTTCTTTGCAAAACAGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTATGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCAAAAAGACCCCCAGGAGAGGAAAACTTGGTGATATGGGCTAAACCTTTGCTCAGGAAAGGGAAAGGAGCGATTCAACAGTTGCTTGATCCTCAAGTCAAGTACAATTCGAGTTACACAGATCAAATGGCTCGAATGGTCGATGCAGCAGCTGCCTGTGTTACAAATGAAGAATCTAGGAGGCCAAGCATAGGTGAGATTGTTGCAATACTGAAAGGTGAAGTTGAACCTGTGCTCTCTAGAAGAAGGAAATCTGGTTATCTTGGTAATGGATTTGTGATTGATTATTACCCTCAGTTACAACAAACAAACAATGAGATGAAAAGTCACTTGGCCTTGGCAATGCTAGGAGTTCCAGAGTGTGAGGATGAGGATTTTCTCTACGGTCGTTGA 1527 0.4342 MMSFCSDHTKGVSNEHVSSAVGNDSSENKRLKFMAFLRKTMWNFALACVGVGPCGGRNDHNGQRKTASEHNKAWLLAESGAELATADPQSVHSSFRFSFCSQVEVESFNMSSSASAAAAATFLMVNLECESQVKEMKWRIHSLEKSMSPVFNPLIRFSYDEILSATHNFSKGRVLGRGALSCVYRGRVGFWRTAVAIKRLDKEDKECAKAFCRELMIASSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGKKKNVKGSSPLPWSVRYQVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAMGVVLLELLTGRKPIEAKRPPGEENLVIWAKPLLRKGKGAIQQLLDPQVKYNSSYTDQMARMVDAAAACVTNEESRRPSIGEIVAILKGEVEPVLSRRRKSGYLGNGFVIDYYPQLQQTNNEMKSHLALAMLGVPECEDEDFLYGR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01677 508 SUPERFAMILY Protein kinase-like (PK-like) 148 450 IPR011009 -
Vian7g01677 508 Gene3D Phosphorylase Kinase; domain 1 154 246 - -
Vian7g01677 508 Pfam Protein kinase domain 170 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01677 508 MobiDBLite consensus disorder prediction 1 23 - -
Vian7g01677 508 FunFam probable serine/threonine-protein kinase PBL7 131 246 - -
Vian7g01677 508 FunFam Putative receptor-like serine/threonine-protein kinase 247 464 - -
Vian7g01677 508 SMART serkin_6 169 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01677 508 PANTHER OS01G0750732 PROTEIN 82 454 - -
Vian7g01677 508 ProSiteProfiles Protein kinase domain profile. 169 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01677 508 Gene3D Transferase(Phosphotransferase) domain 1 247 460 - -
Vian7g01677 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01677 Vian-Chr7 26285228 26287418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01677 157 452 Trihelix Transcription Factor Family AT1G70460 41.946 1.31e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Vian7g01677 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01677 - - gmx:100802176 880.552