Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01643 ATGACAGGGTTTGGCTCATCGTGTGGAGCATGCAAGTTCCTAAGGAGAAAATGCACCAGTGATTGTGTATTTGCTCCTTACTTCTCCTACGACCAAGCTTCATCCCATTTTGCAGCAGTGCATAAGATTTATGGAGCCAGTAACGTCTCCAAGCTACTGTCACATCTTCCAATCCAGAATAGAAGAGATGCTGCCATCACCATATCTTACGAAGCCTTGGCTCGCATGCATGATCCTATTTATGGCTGTGTTGCTCATATCTATGCATTGCAGCAACAGGTTGTGAACTTGCAAGAGGAGATAGATGCTCTTGGAAGCATGGTGGCAAACTCCACAGTTAGTGTTGTCAATTGTGGCACTGTCCAAGCACCAATGTACTCAGACAACGGAATACCTTATGATACTTTGCAGCATGATGCTACGAGGACACAGTATTTTCAAAACAATCTAGCAAACTTTCTTTCAGAAGATGGAAATGCCAGAGCCTTGCAAAGTTTGGAGTCACAGATGAATATAGAGCTTCCTAATGCACACGTGGAAGAACCTTCCTATGGTGATTCCAACTCCAATCCGTTAGAACAGTTCCTATCTGGAATTGACCAAGAGGTGTTCGTGAATCATCCATGGTTCAAGCATAATGCAGACATAAAGGGCTAG 657 0.4384 MTGFGSSCGACKFLRRKCTSDCVFAPYFSYDQASSHFAAVHKIYGASNVSKLLSHLPIQNRRDAAITISYEALARMHDPIYGCVAHIYALQQQVVNLQEEIDALGSMVANSTVSVVNCGTVQAPMYSDNGIPYDTLQHDATRTQYFQNNLANFLSEDGNARALQSLESQMNIELPNAHVEEPSYGDSNSNPLEQFLSGIDQEVFVNHPWFKHNADIKG 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01643 218 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Vian7g01643 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 162 - -
Vian7g01643 218 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01643 Vian-Chr7 25762549 25763645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01643 1 114 AS2 family AT5G06080 73.684 8.83e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vian7g01643 LOB 1.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01643 K13945 - gmx:100787638 337.806