Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01642 ATGCGCTTGGTTCGTCATCCCCACATCGACTTCAACGGGGACAATGTCGGTGGCAGTGTAAACGTAAGCGGCAGTGAAGATGGTAACAGCAGCAACAACCATTCTGGGGAATTGCTCGGGGCTAAGCCAGCTCATCCGTCTTACAATGATTTGAGTAATCTGTTCGAAACGAGGAAGCGGTCGTCGTTGATGTTCATATCAAAGCACTTGACGTCGATGATGGCGAAGCTAGAGGCGGTGACGAAGAAGATGAACTTTAGGGTGACAAGGAAGAAGTCGTTCACGGTGAGGATGTAG 297 0.4983 MRLVRHPHIDFNGDNVGGSVNVSGSEDGNSSNNHSGELLGAKPAHPSYNDLSNLFETRKRSSLMFISKHLTSMMAKLEAVTKKMNFRVTRKKSFTVRM 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01642 98 Gene3D Kinase associated domain 1, KA1 46 98 - -
Vian7g01642 98 MobiDBLite consensus disorder prediction 1 44 - -
Vian7g01642 98 Pfam NAF domain 50 89 IPR004041 GO:0007165
Vian7g01642 98 MobiDBLite consensus disorder prediction 16 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01642 Vian-Chr7 25747534 25747830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01642 50 98 CBL-interacting serine-threonine protein kinases AT5G10930 46.000 1.34e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01642 - - vum:124827272 107.071