Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01641 ATGGCGAACCGTTGGTGGGCCGGGAACATGGCGGTGAAATCTGATGACCCCAACTCATCGCTTCAGCCGAGAGACCAAGACAGCGGCGACAACGCCAACAACGCCACTCCGACCAACAGCGGCAACAGTAACACCAACTTCAACGCTGCCGAGGACGACGACAACCCCGCCAACAACAACGACGGTGACGAGCAGAACCTTAGCAGCGGGCGGCGGCCGAGGGGCAGGCCGCCGGGGTCGAAGAACAAGCCGAAGCCGCCGGTGGTGATAACGAAGGAGAGCCCCAACGCGCTGCGCAGCCACATCCTCGAAATCAGCGGAGGCAGCGACGTGGCGGAGTGCATTGCCACCTTTGCCACGCGCCGCCACCGCGGCGTGTCTGTGCTCAGCGGAAACGGCGTCGTCACCAACGTCACGCTGCGCCAGCCCGCCGCTCCCGGTGGCGTCATCACGCTGCAGGGGAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTCTTCCGGCGCCGTCCCCTCCGGAGGCCACCGGACTAACCGTGTACCTCGCCGGAGGGCAGGGTCAGGTCGTCGGAGGAAGCGTGGTGGGACCTCTTGTCGCCTCGGGACCCGTGATGGTTGTAGCTGCCACCTTTGCTAATGCTACATATGAAAGGTTGCCCTTGGAGGATGAACAAGGCGAAGAGGACATGCAAGAGGTGAATGAAGGTGGTGACGGCGGAACACCACCACCTTCTCTGGGTGATCAACCGCCACAAGTTCCAATGCCGGTGTATAATTTGGTCCCTAACAATGGTGACGTGTTCTGGGGAGCCCCACCTCGTCCTCCTCCACCTTCTAATTATTGA 843 0.618 MANRWWAGNMAVKSDDPNSSLQPRDQDSGDNANNATPTNSGNSNTNFNAAEDDDNPANNNDGDEQNLSSGRRPRGRPPGSKNKPKPPVVITKESPNALRSHILEISGGSDVAECIATFATRRHRGVSVLSGNGVVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGQGQVVGGSVVGPLVASGPVMVVAATFANATYERLPLEDEQGEEDMQEVNEGGDGGTPPPSLGDQPPQVPMPVYNLVPNNGDVFWGAPPRPPPPSNY 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01641 280 CDD DUF296 99 182 IPR005175 -
Vian7g01641 280 MobiDBLite consensus disorder prediction 1 95 - -
Vian7g01641 280 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Vian7g01641 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 269 IPR014476 GO:0003680
Vian7g01641 280 MobiDBLite consensus disorder prediction 13 66 - -
Vian7g01641 280 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 223 - -
Vian7g01641 280 Gene3D - 98 231 - -
Vian7g01641 280 ProSiteProfiles PPC domain profile profile. 95 233 IPR005175 -
Vian7g01641 280 FunFam AT-hook motif nuclear-localized protein 98 226 - -
Vian7g01641 280 MobiDBLite consensus disorder prediction 217 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01641 Vian-Chr7 25743566 25744408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01641 71 262 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 67.179 4.92e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01641 - - gmx:100787100 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02627 2 46989217 46990083 Vian7g01641 7 25743566 25744408 PCT