Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01640 ATGACTTGTGGTCTTTGGGTCAATCCACTAGTATCTCAAAACGAGATATATCAGCTTGAAGGCAGCACGGTCGTCAACCTTGGCGGCCTCGATGGCGGTGTCGAAGGTTCCAAGCCACACTCTCGACCCGCGCTTGTTCGAGTCGTGGATCTCGGCAGAACTTTCCCCAAGGCCGTTGGCGGACTCCTCTGTAGTGCTTCTTCTCCAGTTGGTTCTCCGGTTTCCCAAATTGGATCCACTCGGCCTTCTTGGGGAGAGAGATTTGTAGAGAAGGTTTCCGATTTAATTGAGGTTTCTTGTGAAGCGATGTGGGGCTCTAGGAGCATACCCAGAAAAATTGGACCCACTCGGCCTTCTTGGGGAGAGAGATTTGTAGAGAAGGTTTCCGATTTAATTGAGGTTTCTTGTGAAGCGATGTGGGGCTCTAGGAGCATACCCAGAAAAATGGCTGCCAGAAATCCACTGTTTGACAAAACAAGCACTCTAACTCAGGGGAAATCCACTGTTACTGCTGCAAGGGTATTCACAGGAATGAACTGCAAAGAATTTCTTACATTAGTGGCTTCTGTTGAGGAATTACAGATGTTGGAAAGGAAGCTATTGCTGAATTTAGGACCACTATTGCCTTTTGTATGGCTGTGCTTCATCTTGGCAAGTTCTATTGGTAAATGTCAGGTAGATCTGCTTGACAAAATGGGACATGTAAAGTTGCAAACGCAAACTGGTATCAATGCGATAGAAGAGGCATCTGGACAGTGTGATGCTGAGTATCCTGACAAAACTACTGTGGCATGCATGATCAATGCAGAAATTGGTGCTGTTTTGGCTGTCATGAGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGATCAGTTGGAGCATTCCCTTGTTCAGTCTCTGAAGGCATTAAGGAAGCAAATTTTTTCTTGGCAGAATCAGTGGCATGTAATAAACCCTGCCTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGATGAAACCGGTGCACCAATTACTGGTGTCGCTCTATCATCTGTTTACAAGATCTTGACATTGGATGTAATTGATCAAAATACTGTTAATGTTGGGGATGCCATGCACTTGGTAGTTGATGCTGTTACAAGTTGCAGGTTTGAGGTGACTGATCCTGGATCGGAAGAAGTGGTATTGATGAAGATATTACAAGTTCTTCTAGCATGTGTGAAGAGCAAAGCATCTATGATGCTGAGTAACCAACATATTTGCACCATAGTAAATACTTGTTTCCGTATAGTTCATCAAGCAGGAACCAAAAGTGAATTGTTGCAGCGGATAGCACGTTACACAATGCATGAACTTGTTCGGTGTATTTTTTCTCACCTTCAAGATATTGACAACGCAGAACTTGCTTTAAATAATGGCAGCACTGCTTTACAGAAAGAGATTGTTGGGATAAATAATGATCATAATTCTCCAAATAGACAATTGGACAATGGGAACTTGACTTCTGCTAGTAATGGTCAACCCTTATCCACAGGCATTGCTCCTAGTACTGTGAGTGATGTGGCAGCCACTGTATTGGATGAAGACACAGCTATTGCAAGCAGTGATCAAGTGGCTGACCTGAATGAATTGCAGCTTGTAAATGAACCATATGGGATTCCCTGCATGGTGGAAATATTTCACTTTTTGTGTTCTTTGCTGAACGTTGCTGAACATATGGGAAATAGTCCTCGCTCTAACACTATAGCATTCGATGAAGATGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATAGAGTTGGGAGGGCCTTCCTTTCACCAACACCCTAGATTGCTAAGCTTAATTCAGGATGAATTATTCCGCAATCTTATGCAATTTGGTTTGTCAATGAGTCCTCTCGTACTTTCAATGGTATGTAGCATTGTTCTAAATTTGTATCACCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGACTTGCACAAAGCAAATATGGTGCTTCATATCAGCAGCAGGAAGTTGTCATGGAGGCCCTTGTTGACTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTATGCTAACTTTGACTGTGACCTAACTTGTAGTAATGTCTTTGAAGACATTGCTAATTTGTTGTCCAAAAGTGCTTTCCCTGTGAACAGTCCATTGACTTCCATGCATATTCTTGCTTTGGAGGGTCTTATTGCTGTTATGCACGGAATGGCTGAAAGGATAGGCAATGGATCTTTAAGTTCAGAACAATCTCCTGTGAATCTTGAAGAGTATACTCCGTTCTGGCAGGAAAAGTGTGAAAATTTTTGTGATCCAAAAAATTGGGTTCCTTTTGTATCCCGGAGAAAGTACTTCAAGAAAAGATTGATGATTGGTGCTGATCATTTTAATCGTGATACTAAGAAAGGTCTTGAGTTTCTCCAAGGAACACATCTTTTACCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTCAGATACACTGCTGGGTTGGATAAGAATCTCATTGGTGATTTTCTAGGAAATCATGATGAATTCTGCATTGAGGTTCTTCATGAATTTGCTAAAACATTTGATTTCAAAGACATGATGTTAGACACTGCCCTACGCCTATTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAGAAGATACAGAGGGTGCTTGAAGCTTTCTCAGAACGATATTATGAACAGTCTCCAGAGGTCCTAGCCAATAAAGATGCTGCTCTGTTGTTATCATACTCAATTATAATGCTTAATACAGATCACCACAATTCACAGGTCAGAAACAAGATGACAGAAGAGGATTTTATCCGTAATAATAGGCGAATAAATGGTGGCAATGATCTACCTCGAGACTTTCTGTCTGAACTTTACCATTCAATTTGTAAAAATGAGATTCGAACAACTCCTGAGCAAGGTTCTGGTTTCCCTGAAATGACCCCAAGTCGGTGGATTTATCTCAAGCATAAGTCGAAAAAATCTGATCCATTTATTGTTTCTGATTCCAAAGCATACCTTGATTATGATATGTTTTCTATATTGTCTGGTCCAACAATTGCGGCCATTTCTGTGGTATTTGATAATGCTGAGAATGCGGAGGTATACCAAACATGTATGGATGGATTCATAGCTGTTGCAAAGATATCAGCTTACTATCATCTTGAAAATATACTGGATGATTTGGTTGTGTCACTTTGTAAGTTTGTTACTGTTTTTGATCCATTAGCTGTTGAGGAATCCATCCTAGCCTTTGGAGAAGACATGAAAGCAAGAATGGCAACTGAGACAGTTTTCACTATTGCAAATAGGTATGGTGATTTCATCCGCACAGGGTGGAGAAATATTCTTGATTGCATCTTAAAATTTCACAGGTTAGGGCTTCTTCCTACTCGTATTGCCAGTGATGCAGCAGAAGAGTCAGAGCTTTCTACAGAAACTGAGGATGGGGGGAAGCGTACTACTAATGCTTTATCTTTATCGCGTCTTCCGTCTGTAAATACTACAAAGAGATCCTCTGGATTGATGAGCAGGTTTAGTCAACTCTTGTATCTAGGTGCCGAAGAGCCAAAATCAGTTCCTAGTGAAGAACAACTTGCTGCTCAGCAATGCACCCTTCAAACAATTCAGAAGTGTCACATTGACAGCATATTCTCTGAGAGTAAATTTTTGCAAGCCGAATCTCTATTGCAGCTTGCAAAAGCAATCACTAGCGCAGGAGTGAGACCTAAGAAAGGGAACAGCACATCTGAGGACGAAGATACTTTGGTTTTCTGCCTGGAGTTACTGGTAGCAATCACTCTGAATAACAGGGATAGAATTGAACTTCTTTGGCAGGGTGTATATGAGCATATTTCCAACATTGTTCAGTCAACCGTGATGCCTTGTGCATTGGTTGAAAAGGCTGTTTTTGGCCTTTTACGAATTTGTCATCGCTTACTTCCCTATAAAGAGAACATTACTGATGAACTTCTGAGGTCTCTGCAACTTGTCCTTAAGCTTGATGCTCGTGTTGCTGATGCATACTATGAGCAGATAACACAGGAAGTTAGTCACCTCATGAAGGCAAATGCCTCTCATATTAGATCTCATTTAGGATGGCGGACAATTACATCACTGCTTTCCATCACTGCTAGACACCTGGAAGCAGCTGAGGCCGGTTTTGACGCATTGTTGTTCATCATGTCAGATGGAGCCCACTTGCTTCCAGCTAATTATGTTCTCTGCATAGATGCAGCGAAGCAGTTTGCTGAATCTCGTGTTGGACAGGTTGAACGGTCTGTAATGGCCCTTGATCTTATGTCAGGGTCTGTCAGTTGTTTAGAGAAGTGGACTAATGATGCTAAGCAAGCAACGAAAGAAGAGGAATTGGCAAAGGTGTTGCAGGATATTGGGGACATGTGGTTGAGGCTCGTACAGGGACTAAAAAAACTGTGTCTGGACCAGAGAGAGGAGGTTAGAAACCATGCGTTGTTATCTTTACAAAAGTGCTTGACAGGATCAGTGGGGATTAATCTCCCACATAACTTGTGGTTGCAATGTTTCGATCAAGTGATCTTCTCTGTGCTTGATGACCTGATTGAAATTTCTCAAACACAGTCTCAAAAGGACTACCGGAACATAGAAGGAACACTAGTTCTCGCTCTGAAGCTCCTGTGTAAAGTTTTCCTCCAGTTAATCCAATTTCTATCAGAATTGCCAGACTTCAGCACATTATGGTTGGCTGTACTAAGTCGGTTAGAAACTTATATGAAGGTGAAAATTAGAGGAAGGAGAAGCGAGAAGCTTCACGAACTTGTGCCTGAGCTTCTTAAGAACACTGTGCTTGTTATGAAAACGGGGCAAGTACTAGTGCGGAGCAGTAGTGTAGATGGAAGTAGTTTGTGGGAACTGACATGGCTGCATATAAATAATATTTCTCCGTCAATGCAAGCTGAGGTGTTCCCGGAGTCAGACTCCAAGGATTTGCAGAAAAAACAGACTGAAAAGGTTGAAGGTTTGGTATCTGATGAAAACAATTCTGTGTCTTCAAATGAAACAGCAGGTCAAGATGGTCCTGGTTGTCCGGGTTCTCTTCAAGTGATTATGCAGAACTTATCAGATCTCATTCACATCTTCACTGGGACTCTTGATGCTAGTGTACGGTTTTTGGTTGAAGAACTTGATATTCTCTTTACCTAG 5226 0.4156 MTCGLWVNPLVSQNEIYQLEGSTVVNLGGLDGGVEGSKPHSRPALVRVVDLGRTFPKAVGGLLCSASSPVGSPVSQIGSTRPSWGERFVEKVSDLIEVSCEAMWGSRSIPRKIGPTRPSWGERFVEKVSDLIEVSCEAMWGSRSIPRKMAARNPLFDKTSTLTQGKSTVTAARVFTGMNCKEFLTLVASVEELQMLERKLLLNLGPLLPFVWLCFILASSIGKCQVDLLDKMGHVKLQTQTGINAIEEASGQCDAEYPDKTTVACMINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKALRKQIFSWQNQWHVINPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNVGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASMMLSNQHICTIVNTCFRIVHQAGTKSELLQRIARYTMHELVRCIFSHLQDIDNAELALNNGSTALQKEIVGINNDHNSPNRQLDNGNLTSASNGQPLSTGIAPSTVSDVAATVLDEDTAIASSDQVADLNELQLVNEPYGIPCMVEIFHFLCSLLNVAEHMGNSPRSNTIAFDEDVPLFALTLINSAIELGGPSFHQHPRLLSLIQDELFRNLMQFGLSMSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYANFDCDLTCSNVFEDIANLLSKSAFPVNSPLTSMHILALEGLIAVMHGMAERIGNGSLSSEQSPVNLEEYTPFWQEKCENFCDPKNWVPFVSRRKYFKKRLMIGADHFNRDTKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLIGDFLGNHDEFCIEVLHEFAKTFDFKDMMLDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPEVLANKDAALLLSYSIIMLNTDHHNSQVRNKMTEEDFIRNNRRINGGNDLPRDFLSELYHSICKNEIRTTPEQGSGFPEMTPSRWIYLKHKSKKSDPFIVSDSKAYLDYDMFSILSGPTIAAISVVFDNAENAEVYQTCMDGFIAVAKISAYYHLENILDDLVVSLCKFVTVFDPLAVEESILAFGEDMKARMATETVFTIANRYGDFIRTGWRNILDCILKFHRLGLLPTRIASDAAEESELSTETEDGGKRTTNALSLSRLPSVNTTKRSSGLMSRFSQLLYLGAEEPKSVPSEEQLAAQQCTLQTIQKCHIDSIFSESKFLQAESLLQLAKAITSAGVRPKKGNSTSEDEDTLVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICHRLLPYKENITDELLRSLQLVLKLDARVADAYYEQITQEVSHLMKANASHIRSHLGWRTITSLLSITARHLEAAEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVMALDLMSGSVSCLEKWTNDAKQATKEEELAKVLQDIGDMWLRLVQGLKKLCLDQREEVRNHALLSLQKCLTGSVGINLPHNLWLQCFDQVIFSVLDDLIEISQTQSQKDYRNIEGTLVLALKLLCKVFLQLIQFLSELPDFSTLWLAVLSRLETYMKVKIRGRRSEKLHELVPELLKNTVLVMKTGQVLVRSSSVDGSSLWELTWLHINNISPSMQAEVFPESDSKDLQKKQTEKVEGLVSDENNSVSSNETAGQDGPGCPGSLQVIMQNLSDLIHIFTGTLDASVRFLVEELDILFT 1741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01640 1741 Gene3D - 875 992 IPR023394 -
Vian7g01640 1741 ProSiteProfiles SEC7 domain profile. 791 980 IPR000904 GO:0005085|GO:0032012
Vian7g01640 1741 CDD Sec7 799 982 IPR000904 GO:0005085|GO:0032012
Vian7g01640 1741 FunFam ARF guanine-nucleotide exchange factor GNOM 792 874 - -
Vian7g01640 1741 FunFam ARF guanine-nucleotide exchange factor GNOM-like 874 992 - -
Vian7g01640 1741 SUPERFAMILY Sec7 domain 796 983 IPR035999 GO:0005085|GO:0032012
Vian7g01640 1741 Gene3D - 792 874 - -
Vian7g01640 1741 MobiDBLite consensus disorder prediction 1682 1699 - -
Vian7g01640 1741 SUPERFAMILY ARM repeat 583 1597 IPR016024 -
Vian7g01640 1741 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 552 713 IPR032691 -
Vian7g01640 1741 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 302 1668 - -
Vian7g01640 1741 MobiDBLite consensus disorder prediction 1666 1681 - -
Vian7g01640 1741 MobiDBLite consensus disorder prediction 1665 1704 - -
Vian7g01640 1741 MobiDBLite consensus disorder prediction 1154 1173 - -
Vian7g01640 1741 SMART sec7_5 795 982 IPR000904 GO:0005085|GO:0032012
Vian7g01640 1741 Pfam Sec7 domain 799 982 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01640 Vian-Chr7 25702296 25715468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01640 141 191 Primary Pumps ATPases AT5G44790 50.980 2.48e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01640 K18443 - gmx:100784083 2660.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01640 7 25702296 25715468 Vian2g02621 2 46928127 46933157 PCT