Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01637 ATGGGAGATGAGAGAATCAGACAAGAATCTCATATTCTACGATGTCGCCACGTGGTAGCATCGGCAGGGGTGACACCTAAAAGAGAGAAAAAATGCAAAGGAGAAAATTTGAGCGGGTGTGTGAGAGAGAGGGGAAAGGACCATATGCGTGTCAGAAAAGGAACAAGTTTGGTCCTAGCGTGGGGAGTTGTGATTGGTCCACGTGTAGAAGCACAAAGGACAGGACCACGTGTAGGAATCAGAGGTAGGAGACGATACGATGAAGGGTTGGGATTGCATGTGGGTATTAAATGGTTCGACGTCATTCCAACTTGTGTTTCGTTTTGGATGGCTGGGATTTGTTGCGGCGTTGTTGGAGAGGCCGGAGAGACTTCTTCTCCGACCAAGCCTACCTCGCGCCCTTTCTCTCGCCGGAGTTTGGACCAACTGCCTTTAAAATACATCGCCGGAGTGGCAATCCCGGCGCCGGAGAATCCTCGGAAGCGCCAGAAGCTGGATCAGCGCGCTTCTCCGGCGCGGAAGTGTGAAAACGCGATTCAGAGTTCTGAATCGAAGGAAGTCGAGGATGTCTCGCATACGAATTGTTCGAAGGTTCCTACTTTGGACTTGACAACGGGTGTGGTCGAAGAGGTGTGTCCGAAGTATGGGGTAACCTCGGTTTGTGGCAGGAGGAGGGACATGGAAGACGCAGTTTCAGTGCATCCTTCGTTTTGCCTGGAAAGTCGTGATGAAGATCAGAAAGGGTTTCATTTCTTCGCTGTTTTTGACGGCCACGGATGCTCACACGTGGCGACTATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAGGAGATTCAAAAAGCGAAAGATAATTTGGAATGGGAATCGACGATGAAGAAGAGTTTCGCTCGAATGGACGACGAGGTGCAAAGGTGGAGCAGAAACAATGAGACACGCCCATGCAGGTGCGAGCTTCAGACCCCGCGCTGCGACGCCGTTGGCTCCACCGCGGTCGTCGCCGTCGTCACGTCGGAAAAGATCATCGTGGCCAACTGCGGCGACTCACGCGCCGTGCTCTGCCGGAACAGTGCACCCGTTCCGCTCTCCGACGACCACAAGCCGGATCGACCCGACGAGTTGCTTCGGATCCAAGATGCGGGCGGGCGCGTGATATATTGGGACGGGCCTAGAGTGCTTGGGGTCTTGGCCATGTCAAGAGCTATAGGAGACAACTATCTGAAGCCGTATGTAATTTCGGAACCGGAGGTAACGGTAACGGAACGGAGTGAAGAGGATGAGTGTTTGATAATAGGGAGTGACGGGCTTTGGGACACGGTGCAAAACGACACGGCGTGTAAGGTGGCGCGGATGTGTCTAAACGCGCAGAAGGCGGCGGCGTCTCCGGGGAGGGAGTCGGCGGTGGAGTGCTCCGACAAGGCGTGCTCCGACGCCTCCATTCTGCTGACGAAGTTGGCGTTGGTGAGGCACAGTTCCGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAGATGATCGTGAACAATAA 1530 0.5399 MGDERIRQESHILRCRHVVASAGVTPKREKKCKGENLSGCVRERGKDHMRVRKGTSLVLAWGVVIGPRVEAQRTGPRVGIRGRRRYDEGLGLHVGIKWFDVIPTCVSFWMAGICCGVVGEAGETSSPTKPTSRPFSRRSLDQLPLKYIAGVAIPAPENPRKRQKLDQRASPARKCENAIQSSESKEVEDVSHTNCSKVPTLDLTTGVVEEVCPKYGVTSVCGRRRDMEDAVSVHPSFCLESRDEDQKGFHFFAVFDGHGCSHVATMCKERLHEIVKEEIQKAKDNLEWESTMKKSFARMDDEVQRWSRNNETRPCRCELQTPRCDAVGSTAVVAVVTSEKIIVANCGDSRAVLCRNSAPVPLSDDHKPDRPDELLRIQDAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSEEDECLIIGSDGLWDTVQNDTACKVARMCLNAQKAAASPGRESAVECSDKACSDASILLTKLALVRHSSDNVSVVVVDLRRDDREQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01637 509 MobiDBLite consensus disorder prediction 158 183 - -
Vian7g01637 509 FunFam Protein phosphatase 2C 37 209 509 - -
Vian7g01637 509 SMART PP2C_4 202 500 IPR001932 -
Vian7g01637 509 ProSiteProfiles PPM-type phosphatase domain profile. 214 502 IPR001932 -
Vian7g01637 509 Gene3D - 204 509 IPR036457 -
Vian7g01637 509 PANTHER PROTEIN PHOSPHATASE 178 502 IPR015655 GO:0004722|GO:0006470
Vian7g01637 509 Pfam Protein phosphatase 2C 214 470 IPR001932 -
Vian7g01637 509 ProSitePatterns PPM-type phosphatase domain signature. 251 259 IPR000222 GO:0043169
Vian7g01637 509 SUPERFAMILY PP2C-like 199 503 IPR036457 -
Vian7g01637 509 CDD PP2Cc 214 459 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01637 Vian-Chr7 25655101 25657308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01637 213 504 PP2C-type Phosphatase Gene Family AT1G07430 63.836 1.33e-139 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01637 K14497 - gmx:100781388 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02615 2 46871549 46873129 Vian7g01637 7 25655101 25657308 ECH
Vian7g01637 7 25655101 25657308 Vian7g01637 7 25655101 25657308 ECH
Vian2g02615 2 46871549 46873129 Vian7g01637 7 25655101 25657308 PCT