Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01623 ATGAGCTCACAGGGGCAAGGGATGGATGAGACGGTTCTGGATGACATAATCCGCCGCTTAACGGAGGTCCGATTGGCCCGACCCGGCAAGCAGGTTCAGCTCTCCGAGTCAGAGATCAAGCAACTCTGCGTCGCTTCTCGAGACATCTTCATTAACCAGCCCAATTTGCTTGAACTCGAAGCCCCCATCAAGATTTGTGGTGATATTCATGGGCAGTACAGTGATTTGTTAAGGCTATTTGAGTATGGGGGTTTGCCTCCTAAAGCAAATTATCTCTTTTTGGGGGACTATGTGGACCGTGGGAAGCAGAGCTTAGAAACCATATATGATAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGAACTCACAAACTTGGATGAAATCAGGAATATAATCCGTCCTACTGCAATTCCCGACACTGGCTTGCTTTGTGATTTGCTTTGGTCTGATCCTGGTAGGGATGTGAAGGGCTGGGGAATGAATGACAGAGGAGTGTCCTACACCTTTGGCCCTGATAAGGTGGCTGAATTTTTGACGAAACATGACTTGGATCTCATTTGTCGTGCTCATCAGGTTGTAGAGGACGGGTATGAATTCTTCGCTGACAGGCAACTTGTTACGATATTTTCAGCTCCAAACTATTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTGGATGATAACTTGATGTGCTCTTTTCAGATTCTCAAGCCTGCAGAGAAAAAAACAAAGTTTGTGATGTCAAACAAGATATGA 765 0.4549 MSSQGQGMDETVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCVASRDIFINQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETIYDKILCMHGGLSPELTNLDEIRNIIRPTAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDDNLMCSFQILKPAEKKTKFVMSNKI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01623 254 SUPERFAMILY Metallo-dependent phosphatases 23 247 IPR029052 -
Vian7g01623 254 Pfam Calcineurin-like phosphoesterase 62 108 IPR004843 GO:0016787
Vian7g01623 254 Pfam Calcineurin-like phosphoesterase 110 193 IPR004843 GO:0016787
Vian7g01623 254 FunFam Serine/threonine-protein phosphatase 107 252 - -
Vian7g01623 254 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 108 246 - -
Vian7g01623 254 PRINTS Serine/threonine phosphatase family signature 91 118 IPR006186 GO:0016787
Vian7g01623 254 PRINTS Serine/threonine phosphatase family signature 62 89 IPR006186 GO:0016787
Vian7g01623 254 Gene3D - 5 109 IPR029052 -
Vian7g01623 254 Gene3D - 110 252 IPR029052 -
Vian7g01623 254 SMART pp2a_7 34 243 IPR006186 GO:0016787
Vian7g01623 254 Pfam Serine-threonine protein phosphatase N-terminal domain 13 60 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01623 Vian-Chr7 25536975 25538868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01623 63 108 Calmodulin-binding Proteins AT5G63870 51.064 2.37e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01623 K06269 - gmx:100807069 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01623 7 25536975 25538868 Vian7g01623 7 25536975 25538868 ECH