Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01618 ATGAACGCTTTAGGGTTGTCGCGTCTTCTCCAAATTCTTACGTGCATTCTGCTACTCACTCCCTCATTTTCTAAAGATGATCGAAAGATTTACATAGTCTACATGGGGGAATATCCGAAGGGCGTGGAATTCACAGAGTCACTTCACACTAGTGTGGTTCAAAGTGCCATCAGCAGAAAACTTGCACCAGATACTTTGGTACACAGCTACAAGAGTTTCAATGGATTTGTGGCGAGGCTAACCAAAGAAGAATCAGAAAGAATGAAAGAAATGGATGATGTGGTTTCTGTTATTCCAAATAGAGTCCACAGTGTCCAAACATCAAGGTCCTGGGACTTTCTTGGCTTCCCTGAAAATGTCCAAAGAACAAATGTAGAAAGTAACACAATCGTTGGAGTAATCGACAGTGGAATTTGGCCTAATTCCTCAAGCTTCACCGACGAAGGCTTTGGTCCACCACCACAGAAATGGAAAGGAACGTGCCATAACTTCACTTGCAATAACAAAATCATTGGAGCAAAATATTTTCGTCTTGATGGTGTGTTCGCCCAAGAGGACATCATATCTCCAACTGATACGAGTGGTCACGGGTCTCACTGTGCATCAACTGCTGCTGGAAACCCTGTTAGGAATGCAAATTTGTTTGGGCTTGGCTTAGGAACAGCAAGAGGAGGAGTTCCATTAGCACGTATTGCTGTGTATAAAGTATGTTGGACAAATGGTTGTGAAGCTACTGACATTCTTGCAGGATTTGATGCAGCCATTATGGATGGTGTTGACATTATATCTCTTTCAGTGGGATATGCAGGCGTCATACACGTGGAATATTTTCAAGATGACTTTGCAATAGGAGCCTTCCATGCAATGAAGAGAGGCATATTAACTTCTCAAGCTGCAGGCAATTGGGGTTCAAACCCTTACACAATGTCAAATCTTGCACCGTGGATAATTTCCGTGGCTGCTTCCACCATAGACAGAAAGTTTTTAACCAATCTCCAACTGGGCAATGGCCGAATCTTCCAGGGAATTTCAGTGAATACATTTAGTCCAACACAGAAGAGTTACCCTTTAATTTATGGGGGAGATGCACCAGCTGCTGGATTTAACAGTTCCACATCGAGGTTTTGCCGTGAAAATTCTTTGGATGGAGCTTTGGTGAAAGGGAAAATTGTTTTGTGTGATGGCTATACTCCTTCTCCTTATGTGGGATTTGCTTCTGGGGCTGCTGGTCTTATATTTATATTCCCTAGTACAGCCCCTTTAGTTGTGGCAGAAGTATATGCATTGCCAGCGATTAGCATTACCGCAAGTGATGGGAATTCCGTATTTTCTTATTTAAAGTCAACAAGTAATCCAGCAGCTACCATATTCAAGAGTTACGAAGGAAAAGATTCATCAGCCCCTTACATTGCTCCTTTCTCTTCTAGAGGTCCAAATATGGTCACTCCAAACATTCTTAAGCCTGATATAGCAGCTCCAGGAGTTGAAATTCTGGCTGCATGGTCTCCGATTTCTCCTATTTCTGGCGTTAAAGGAGACAAAAGAGAATCAAATTTCAATATAATATACGGAACTTCAATGGCATGCCCTCATGTTACTGGAGCAGCTGCTTACGTTAAATCATTTCATCCCAACTGGTCTCCTGCTGCAATAAAATCCGCGTTGATGACAACTGCTACCCCTATGAATCCTACAGTTGATTTAGATGCTGAATTTGCTTACGGTGCGGGGCAAATCAATCCTTTGAAGGCAGCAAATCCTGGACTAGTTTATGATGCTGGTGAAAACGATTATATTAGTTTTCTGTGTGGACAAGGTTATAATTCATCATCGCTGCAACTAATTACAGAAGATAAGAGCACTTGCACATCAGCAAATAAAGGATCGGTTTTCGACCTTAATCTCCCGTCTTTTGCTCTATCAACCCCTCGCTCAAGCCACAACAATGTCACTTTTAGTAGAACTGTTACAAATGTTGGATCAGCTACATCCAAATATAGGGCCACGATAACTGCACATCCATCTTCTTTGAAGGTCGAAGTAGTGCCAAATGTTTTGGCCTTCTCATCGTTGGGTCAGAAGCTGTCTTTTACCCTTAAGATTGAAGGAAGCATTAATGCAGACTTGGTTTCTTTTTCTTTGATTTGGGACGATGGCACTTTTAAGGCAAGGAGCCCCGTTGTTGTTTATGTTCCATAA 2199 0.4211 MNALGLSRLLQILTCILLLTPSFSKDDRKIYIVYMGEYPKGVEFTESLHTSVVQSAISRKLAPDTLVHSYKSFNGFVARLTKEESERMKEMDDVVSVIPNRVHSVQTSRSWDFLGFPENVQRTNVESNTIVGVIDSGIWPNSSSFTDEGFGPPPQKWKGTCHNFTCNNKIIGAKYFRLDGVFAQEDIISPTDTSGHGSHCASTAAGNPVRNANLFGLGLGTARGGVPLARIAVYKVCWTNGCEATDILAGFDAAIMDGVDIISLSVGYAGVIHVEYFQDDFAIGAFHAMKRGILTSQAAGNWGSNPYTMSNLAPWIISVAASTIDRKFLTNLQLGNGRIFQGISVNTFSPTQKSYPLIYGGDAPAAGFNSSTSRFCRENSLDGALVKGKIVLCDGYTPSPYVGFASGAAGLIFIFPSTAPLVVAEVYALPAISITASDGNSVFSYLKSTSNPAATIFKSYEGKDSSAPYIAPFSSRGPNMVTPNILKPDIAAPGVEILAAWSPISPISGVKGDKRESNFNIIYGTSMACPHVTGAAAYVKSFHPNWSPAAIKSALMTTATPMNPTVDLDAEFAYGAGQINPLKAANPGLVYDAGENDYISFLCGQGYNSSSLQLITEDKSTCTSANKGSVFDLNLPSFALSTPRSSHNNVTFSRTVTNVGSATSKYRATITAHPSSLKVEVVPNVLAFSSLGQKLSFTLKIEGSINADLVSFSLIWDDGTFKARSPVVVYVP 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01618 732 Pfam Subtilase family 127 577 IPR000209 GO:0006508|GO:0008236
Vian7g01618 732 SUPERFAMILY Subtilisin-like 106 589 IPR036852 GO:0004252|GO:0006508
Vian7g01618 732 Gene3D - 602 731 - -
Vian7g01618 732 FunFam Subtilisin-like protease SBT1.5 128 338 - -
Vian7g01618 732 ProSiteProfiles Serine proteases, subtilase domain profile. 110 585 - -
Vian7g01618 732 CDD Peptidases_S8_3 105 560 IPR034197 -
Vian7g01618 732 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 105 IPR037045 -
Vian7g01618 732 CDD PA_subtilisin_like 331 456 - -
Vian7g01618 732 ProSitePatterns Serine proteases, subtilase family, histidine active site. 196 206 IPR022398 -
Vian7g01618 732 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Vian7g01618 732 PRINTS Subtilisin serine protease family (S8) signature 192 205 IPR015500 -
Vian7g01618 732 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Vian7g01618 732 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 729 IPR045051 -
Vian7g01618 732 Gene3D Peptidase S8/S53 domain 129 598 IPR036852 GO:0004252|GO:0006508
Vian7g01618 732 Gene3D - 325 463 - -
Vian7g01618 732 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Vian7g01618 732 Pfam Peptidase inhibitor I9 31 102 IPR010259 -
Vian7g01618 732 Pfam Fibronectin type-III domain 632 729 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01618 Vian-Chr7 25447939 25452582 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01618 27 730 Subtilisin-like Serine Gene Family AT5G59100 48.050 0.0 630