Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian7g01617 | ATGGAGAACAAAATGAGCGCAGTGTTTGTGATGGGGCTTGTCTTCATAAGCCTTATCTCAGTTACATCTGCTATTTCTGGAACTGCAACTTACTACACAGTTTACAAACCTTCTGCATGCTACGGGTACCAAGATCAGGGAACGATGATAGCTGCTGCAAGCGACGCAATATATGCGAACGGAGCTGCATGTGGTCAAATGTACAAGATCTCGTGCACAGGTGCCACCAACCAAGGTGTGCCTCAGCCATGCAAGGGTGGCAGTGTTACTGTGAAGATTGTTGATCGTTGTCCTTCCCCAGGTTGCCAAGCCACCATTGATCTCTCCCAAGAAGCTTTCTCTGCAATCGCTGACCTCAATGCTGGAAAAATTCAAATTGAATACAACAAGTAA | 393 | 0.4631 | MENKMSAVFVMGLVFISLISVTSAISGTATYYTVYKPSACYGYQDQGTMIAAASDAIYANGAACGQMYKISCTGATNQGVPQPCKGGSVTVKIVDRCPSPGCQATIDLSQEAFSAIADLNAGKIQIEYNK | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian7g01617 | 130 | Gene3D | - | 23 | 130 | IPR036908 | - | |
| Vian7g01617 | 130 | CDD | DPBB_EG45-like | 25 | 129 | - | - | |
| Vian7g01617 | 130 | SUPERFAMILY | Barwin-like endoglucanases | 14 | 129 | IPR036908 | - | |
| Vian7g01617 | 130 | SMART | dpbb_1 | 50 | 128 | IPR007112 | - | |
| Vian7g01617 | 130 | Pfam | Lytic transglycolase | 51 | 128 | IPR009009 | - | |
| Vian7g01617 | 130 | FunFam | Barwin-related endoglucanase | 24 | 130 | - | - | |
| Vian7g01617 | 130 | PANTHER | EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED | 4 | 130 | IPR044206 | GO:0009627|GO:0048046 | |
| Vian7g01617 | 130 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 26 | 130 | IPR007112 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vian7g01617 | 48 | 130 | Expansin Gene Family | AT4G01630 | 35.417 | 3.54e-08 | 48.5 |