Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01616 ATGGGTGATCACCCTAAGGGCATGGACCTCACTTCCGTACCTTCTCTTCATACCACCATGGCTCAAAATGTCCTTGGCAGCGATTTCAAACCCGAAGCTGTAATCCACAGCTACAAGAACTTCAATGCGTTCGTCATGAAGTTAACAGAAGAGGAGGCTAAAAGAATGGCAGAAATGGAGAACGTTGTCTCTGTTTTCCCAAACGGCAAGAATCGTCTTCACACGACAAGGTCGTGGAACTTCTTAAGGTTTCCCCAGAATGTTAATAGAGAAACCTCAGAGAGTGACATAATTGTGGGAGTAATAGACAGTGGTATTTGGCCCGAGTCTGAGAGCTTCAGTGACAAAGGGTTTGGTCCTCCACCGGCCAAGTGGAAAGGATCATGTCATAACTTTACCTGCAACAACAAAATAATTGGCGCAAAGTACTTCAATCTGGAGAAAGAGTTTGCAAAAGATGATATAATATCTCCAAGAGACGCAGAAGGTCATGGATCACATTGTGCATCCACAGTTGCTGGAAACTCGGTTAACTCAGTGAGTGTATTTGGCTTAGCCTCAGGGACTGCCCGTGGAGGAGTTCCGTCTGCCCGAATCGCTGTGTACAAAGTATGTTGGAAGACAGGAAGTTGTGGCGATGCTGACACCCTTGCAGCATTTGATGAAGCTATCAGTGATGGAGTAGACGTAATTTCTATTTCAACTGGACTCGGAGCAGTAGTCTACGTTCCGTATTTCAAAGATTCAAATAATATAGGAAGTTTTCATGCAATGAAAAAAGGGATATTAACCTCAAATTCTGCCAATAATTTGGGTCCAGGTCTTTCCTCAATGACAAATTATCCACCATGGTTACTTTCTGTGGCTGCAAGCGCTTTCGACAGAAAGATTGTCACCAAGGTGAAGCTGGGCAATGGCGCGGTATATGAGGGGGTTTCAATCAACACATTTGATCTTAAGGGAAAACCTTATCCACTTGTATATGGTGGAGATGTACCTGATATTGGTGGTGGACATAACAGCTCGACATCTAGGTTTTGCGTAAAGGACTCTTTGGATAAGCATTCAGTAAAGGGAAAGATTGTTCTGTGTGAAAGCATTCAGAGTTCTGAGGATGTAGGGTTTTTGTCTGGGGCAGCCGGTGTTATATTTGGAAATAATTACCCTAAAGATTTGCCCGGAGCATATGCCTTGCCTGCTTTGGAGGTTACTCAGTGGGATCAAAGACTCATACATTCTTATTTAAATAAAAACAGAAATGCAACAGCCACAATATTTAAGAGTGAAGAAGTAAACGATGGACTAATCCCTTTCATATCTTCATTCTCCTCAAGAGGTCCAAATCCAATCACACCAAATACGCTAAAGCCTGACATTGCTGCTCCTGGAGTTGAAGTTATAGCTGCATGGTCTCCAATTGACCCAATTTCAGATGTTAAAGGTGACAAAAGAAAAGTACTATATAATGTAATCTCAGGCACTTCCATGGCATGCCCTCATGCTACTGCAGCAGCTGCATATGTCAAATCATTTCATCCCAATTGGTCTCCAGCCATGATCAAGTCTGCACTGATGACCACTGCTATTCCAATGAGTCGCACTCTTAATCCTGAAGCTGAATTTGCATATGGAGCTGGGCTTATTAATCCTGCTAAGGCCGCAAATCCTGGTTTAGTGTATGATATTGGTGAAGCAGATTACGTAAAGTTCTTGTGTGGAGAAGGATACACAGATAAAGAGCTTCGAGTCCTAACTGAAGATCATAGTAGTTGCAAAGGACAAGCAAGCAAGAAAGCTGTGTATGAATTAAACCTCCCATCATTTGCACTTTTTGTAAATGGTTCAGATTTTAGTAGTGCTTATCGAAGAACTGTTACAAATGTGGGATCCAAAACATCTACGTATAAAGCCAGAGTAATTGCTCCATCTTTGTTAAATATTCAAGTGAAACCCAGGACTCTTTCCTTCACATCTATAGGGCAGAAAAAGTCATTTTATGTGATAATTGAAGGGAGAATCAATGTGGAAATACTCTCTGCTTCTTTGATTTGGGATGATGGAAATCATCAAGTTAGAAGCCCAATTGTAGTGTACGGGTCTGTAGACAGTTGA 2112 0.4195 MGDHPKGMDLTSVPSLHTTMAQNVLGSDFKPEAVIHSYKNFNAFVMKLTEEEAKRMAEMENVVSVFPNGKNRLHTTRSWNFLRFPQNVNRETSESDIIVGVIDSGIWPESESFSDKGFGPPPAKWKGSCHNFTCNNKIIGAKYFNLEKEFAKDDIISPRDAEGHGSHCASTVAGNSVNSVSVFGLASGTARGGVPSARIAVYKVCWKTGSCGDADTLAAFDEAISDGVDVISISTGLGAVVYVPYFKDSNNIGSFHAMKKGILTSNSANNLGPGLSSMTNYPPWLLSVAASAFDRKIVTKVKLGNGAVYEGVSINTFDLKGKPYPLVYGGDVPDIGGGHNSSTSRFCVKDSLDKHSVKGKIVLCESIQSSEDVGFLSGAAGVIFGNNYPKDLPGAYALPALEVTQWDQRLIHSYLNKNRNATATIFKSEEVNDGLIPFISSFSSRGPNPITPNTLKPDIAAPGVEVIAAWSPIDPISDVKGDKRKVLYNVISGTSMACPHATAAAAYVKSFHPNWSPAMIKSALMTTAIPMSRTLNPEAEFAYGAGLINPAKAANPGLVYDIGEADYVKFLCGEGYTDKELRVLTEDHSSCKGQASKKAVYELNLPSFALFVNGSDFSSAYRRTVTNVGSKTSTYKARVIAPSLLNIQVKPRTLSFTSIGQKKSFYVIIEGRINVEILSASLIWDDGNHQVRSPIVVYGSVDS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01616 703 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Vian7g01616 703 SUPERFAMILY Subtilisin-like 73 558 IPR036852 GO:0004252|GO:0006508
Vian7g01616 703 Pfam Fibronectin type-III domain 602 697 IPR041469 -
Vian7g01616 703 ProSiteProfiles Serine proteases, subtilase domain profile. 78 554 - -
Vian7g01616 703 Pfam Subtilase family 95 546 IPR000209 GO:0006508|GO:0008236
Vian7g01616 703 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 697 IPR045051 -
Vian7g01616 703 Gene3D - 571 700 - -
Vian7g01616 703 Gene3D - 294 432 - -
Vian7g01616 703 FunFam Subtilisin-like protease SBT1.5 96 305 - -
Vian7g01616 703 ProSitePatterns Serine proteases, subtilase family, histidine active site. 164 174 IPR022398 -
Vian7g01616 703 CDD PA_subtilisin_like 301 425 - -
Vian7g01616 703 CDD Peptidases_S8_3 73 529 IPR034197 -
Vian7g01616 703 Pfam Peptidase inhibitor I9 10 74 IPR010259 -
Vian7g01616 703 Gene3D Peptidase S8/S53 domain 96 567 IPR036852 GO:0004252|GO:0006508
Vian7g01616 703 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Vian7g01616 703 PRINTS Subtilisin serine protease family (S8) signature 160 173 IPR015500 -
Vian7g01616 703 PRINTS Subtilisin serine protease family (S8) signature 492 508 IPR015500 -
Vian7g01616 703 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01616 Vian-Chr7 25319289 25323431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01616 1 698 Subtilisin-like Serine Gene Family AT5G59100 46.770 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01616 - - gmx:100815516 1204.89