Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01606 ATGTTGGTCACTACTGAGGACAAGTCTCATGTTGTTGTCGTTGACATACACAGTGATGGCTGTTGTCAACGGAGCTCGGCCACCGATGAGGGGTGTTCTGACGCCACCGACCGGTCGCATGAGGAGCAAAGGTCTTCCCATGATCCTGGCTCTGAGATAGTAGGAGTGTGTGAGAAGGAGAGAAGATCCTCTGCTTCAGAGTGTTCGGTGGAGGTGGATCTGGAGGAGGATTCAGTCCCCGAAGTTAAGGTGCATTTGGATAAAGTGGAGAGGGATTGTAGGATTTGCCATCTCAGCATGGATATGACCAACCATGAATCTGGTACTCCCATTGAGCTGGGATGCTCTTGCAAGGATGATTTGGCTGCTGCTCACAAGCAGTGTGCTGAGGCTTGGTTCAAGATCAAGGGCAACAAAACATGTGAAATCTGTGGATCAATTGCACGCAATGTAGCTGGAGCTATTGAAATTCAAATGACAGAACAATGGAATGAGGGAAATGATGGTTCGACGGCAGCACAATCTGGAGCCGCAGGAGCCACAGAAAATAGAAATTTCTGGCAGGGTCATCGTTTTTTGAACTTCCTGCTAGCATGTATGGTGTTTGCCTTTGTGATATCATGGCTCTTTCACTTTAATGTACCCTCTTGA 651 0.4793 MLVTTEDKSHVVVVDIHSDGCCQRSSATDEGCSDATDRSHEEQRSSHDPGSEIVGVCEKERRSSASECSVEVDLEEDSVPEVKVHLDKVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIARNVAGAIEIQMTEQWNEGNDGSTAAQSGAAGATENRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01606 216 MobiDBLite consensus disorder prediction 23 53 - -
Vian7g01606 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 153 IPR013083 -
Vian7g01606 216 ProSiteProfiles Zinc finger RING-CH-type profile. 85 151 IPR011016 GO:0008270
Vian7g01606 216 SMART ringv_2 92 145 IPR011016 GO:0008270
Vian7g01606 216 PANTHER ZINC FINGER, RING-CH-TYPE 19 215 - -
Vian7g01606 216 MobiDBLite consensus disorder prediction 31 53 - -
Vian7g01606 216 Pfam RING-variant domain 93 144 IPR011016 GO:0008270
Vian7g01606 216 SUPERFAMILY RING/U-box 90 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01606 Vian-Chr7 25108465 25111400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01606 33 216 C3H Transcription Factor Family AT5G05830 63.441 1.49e-75 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01606 7 25108465 25111400 Vian7g01606 7 25108465 25111400 ECH