Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01603 ATGGTTAAAGGACGCCAAGGAGAACGTGTTAGACTTTATGTCAGGGGCTCAATTCTTGGATACAAGAGGTCCAAGTCAAATCAGTACCCAAATACTTCTCTCATCCAGATTGAGAATGTGAACTCCAAGGAAGAAGTTGCCTGGTACGCTGGGAAGCGCATGGCTTACATTTACAAAGCCAAGGTAAAGAAGAACGGCAGCCATTATCGATGCATTTGGGGTAAGGTCACCAGACCTCATGGTAACAGTGGTGTCGTTAGAGCTAAGTTCAAGTCAAATCTGCCGCCAAGATCGATGGGAGCAAGGATAGCAAGTGAAAATCCTTTCTGCTTGAGCCTTCTCCTTTGTCCATGGAGATATGCTCCAATTTTTCTTGAAGATGGAATTTTTGTGGTGATTTTGCAATTAGGTATTGAAGGCAATATTCACGATTCTCAGGACTCGTTGGTCGTGGGGCTTGTTTATCTGGATACTTAA 477 0.4382 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIENVNSKEEVAWYAGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARIASENPFCLSLLLCPWRYAPIFLEDGIFVVILQLGIEGNIHDSQDSLVVGLVYLDT 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01603 158 Pfam Ribosomal protein L35Ae 12 103 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vian7g01603 158 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vian7g01603 158 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Vian7g01603 158 Gene3D translation elongation factor selb, chain A, domain 4 6 106 IPR038661 -
Vian7g01603 158 FunFam 60S ribosomal protein L35a 7 105 - -
Vian7g01603 158 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 104 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vian7g01603 158 SUPERFAMILY Translation proteins 12 103 IPR009000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01603 1 103 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 87.379 8.82e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01603 K02917 - gmx:100499746 209.534