Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01592 ATGCCTTCTTCCGCTTCTGCACCTACCTTGCTCTCCAAATGCACTGTCTTCCCAGACCAACCCTCAACTCTGGGAAACCTCAAACTCTCCGTTTCGGACCTTCCCATGTTGTCCTGCCACTATATCCAAAAGGGATGTCTCTTTACCCAACCCAGTATTCCACTCCACACTCTAATTCCTCTTCTTAAATCCGCACTCTCTCGCACACTTTCTCTCTTTCCACCTCTAGCTGGCCGTTTAACCACCGATTCCCACGGTTACGTTTACATCGCTTGCAACGACGCCGGCGTCGATTTCATACATGCCAATGCCGCCGCCCTCCGCGTCTGCGACCTACTGTCCCCACTCGACGTCCACGAATGCTTCAAGGAATTTTTCACCTTCGACAGAAAAGTCAGCTACACCGGCCATTACTCCCCGATTCTCGCCGTTCAGGTCACCGAACTCGCTGACGGCCTCTTCATCGGCTGCGCCGTCAATCACGCCGTCACCGACGGCACCTCCTTCTGGAACTTCTTCAACACCTTCGCCCATCTCTGCAGAGCATCGAGTAAAAGCTTCCGCAATATACCGGACTTCCACCGCGACTCAGCTCTGATCTCTGACGCCGTCCTCCGCCTACCCGAGGGCGGTCCTCAGGTCACGTTCGATTCTCACGCGCCGCTGCGCGAGAGAATCTTCAGCTTCAGCCGCGAAGCGATTCAGAAGCTGAAGGCAATGACGAACAACCGCCGATGGCCGGAGAACAACGGCACGGCCGTCGAGTTGATGCGGAAGCAAAGCAACGATCAGTTTCATCACGCGAAGGAGAACAACGGCAAGGCCGGCACAATTCTGGAGAACTGGTTCAAGGTGAATTCGAATTCGAAACCGCAAACGGTTACCGAAACAGTGGAGATTTCGTCGTTTCAATCGGTGTGCGCGTTGCTGTGGCGCGCGGTTACGCGCGCGAGGAAATTGCCTGCGTCCAAAACGACGACGTTCAGAATGGCAGTTAACTGTCGTCATCGAATGGAACCAAAATTGGAACCGTACTACTTCGGGAACGCGATTCAGAGCGTCCCAACGTATGCTTCTGCCTGTGACGTGTTATCGAGGGATCTACGGTGGTGCGCGGAGCAGCTGAACGCAAACGTGAAGGCGCACGACGACGCTATGGTGCGACGCTTCATAGACGATTGGGAGCAGAAACCCAGGTGTCGGGGACGACGGTGGGGAGGAAATCTGCTGGCTACGGTAGGAGGCGTAGAGGTGGAGTGCATGTTAGTAGACACTGATGCGGGAGTTAGGGTTGTGGGCGGATAG 1305 0.5517 MPSSASAPTLLSKCTVFPDQPSTLGNLKLSVSDLPMLSCHYIQKGCLFTQPSIPLHTLIPLLKSALSRTLSLFPPLAGRLTTDSHGYVYIACNDAGVDFIHANAAALRVCDLLSPLDVHECFKEFFTFDRKVSYTGHYSPILAVQVTELADGLFIGCAVNHAVTDGTSFWNFFNTFAHLCRASSKSFRNIPDFHRDSALISDAVLRLPEGGPQVTFDSHAPLRERIFSFSREAIQKLKAMTNNRRWPENNGTAVELMRKQSNDQFHHAKENNGKAGTILENWFKVNSNSKPQTVTETVEISSFQSVCALLWRAVTRARKLPASKTTTFRMAVNCRHRMEPKLEPYYFGNAIQSVPTYASACDVLSRDLRWCAEQLNANVKAHDDAMVRRFIDDWEQKPRCRGRRWGGNLLATVGGVEVECMLVDTDAGVRVVGG 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01592 434 Gene3D - 9 206 IPR023213 -
Vian7g01592 434 SUPERFAMILY CoA-dependent acyltransferases 37 182 - -
Vian7g01592 434 Gene3D - 208 427 IPR023213 -
Vian7g01592 434 Pfam Transferase family 10 396 - -
Vian7g01592 434 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 11 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01592 Vian-Chr7 24906841 24911419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01592 61 398 Monolignol Biosynthesis Gene Families AT5G48930 27.193 7.23e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01592 - - gmx:100779616 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01592 7 24906841 24911419 Vian7g01592 7 24906841 24911419 ECH
Vian2g02574 2 46438101 46440565 Vian7g01592 7 24906841 24911419 PCT