Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01577 ATGGGGAGGTTGTTTGTGGTTCATCTCGAGGGGAAGGTCTATAGCTGCAAACACTGCCGTACCCATCTTGCTCTCTATGAAGACATCGTTTCCAAGTCTTTCCACAGCAGACATGGGAAAGCTTATCTCTTCAGTAAGGTCGTGAATGTTACTGCTGGAGAAAACGAGGACAGACAGATGCTCACTGGGATGCATACTGTGGCTGACATTTTCTGTGTGGGGTGTGGATCAATTGTGGGTTGGAAATACGAGACAGCTCATGAAAAAATCCAGAAGTACAAGGAAGGAAAATCTGTACTTGAACGGTACAAGGTGTCAGGTCCTGATAGCTGCAATTATTGGGTCGGCCATGAAGCACATGGTGGAAGTGATGCAGATGACGCTTAG 387 0.4677 MGRLFVVHLEGKVYSCKHCRTHLALYEDIVSKSFHSRHGKAYLFSKVVNVTAGENEDRQMLTGMHTVADIFCVGCGSIVGWKYETAHEKIQKYKEGKSVLERYKVSGPDSCNYWVGHEAHGGSDADDA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01577 128 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Vian7g01577 128 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Vian7g01577 128 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 106 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01577 Vian-Chr7 24715214 24717519 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01577 - - gmx:100780394 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02990 2 50539714 50541184 Vian7g01577 7 24715214 24717519 ECH
Vian7g01577 7 24715214 24717519 Vian7g01577 7 24715214 24717519 ECH
Vian2g02990 2 50539714 50541184 Vian7g01577 7 24715214 24717519 PCT