Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01574 ATGGCGGGGAAACTGGCAAAGGCAGCTTATGATGCAAAGATGTTGAAGCTTCTGAGAGAGTATAGTCAGGTACTGGTGGTTTCATCTGACAATGTGGGTTCAAACCAGCTTCAGGGGATACGGAGGGGACTCCATGCTGATTCAGTTGTGGTGATGGGAAAGAACACCTTGATGAAACGCTCTATCATCATGGATGCTCAGAAGACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGGAATGTGGCATTAATTTTCACCAAAGGTGACGTAAGAGAGGTCAGCGAACAGATTGCCAAGTACAAGTCCATGAAGGAAAATATCTATGGAGAAGCAACAACTGAAACCCCTATCCTTGTTGTTCAACCGATTCTAATGTGCCCCAAGTATATGTCACATGACACATACCAGAATTGTTCCTATATGCAATCTGGACAGTTACCTTTGGGCCTCACATGTTGTAATCAACAGCAGTCTTCGCAGGTTTCTGAGCCTTTTCTTGTATGCTCAAAATTCCAGCCACACCAACATTGTTTCATGATGAGATCAAGGCAGTTCTTGATGACAAGTATATGGTCTCCTCTTCTCCTTTTGGCTGGCAACTTGTGA 618 0.4482 MAGKLAKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRGLHADSVVVMGKNTLMKRSIIMDAQKTGNKAFLNLVPLLVGNVALIFTKGDVREVSEQIAKYKSMKENIYGEATTETPILVVQPILMCPKYMSHDTYQNCSYMQSGQLPLGLTCCNQQQSSQVSEPFLVCSKFQPHQHCFMMRSRQFLMTSIWSPLLLLAGNL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01574 205 SUPERFAMILY Ribosomal protein L10-like 7 105 IPR043141 -
Vian7g01574 205 Gene3D - 4 142 IPR043141 -
Vian7g01574 205 Pfam Ribosomal protein L10 6 104 IPR001790 -
Vian7g01574 205 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 6 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01574 Vian-Chr7 24666482 24668236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01574 7 105 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 68.687 2.11e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01574 K02941 - mnt:21409050 155.992