Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01549 ATGGCCTCTCTCCAACCTCAACCCCAAGACACCAAACCCACCGTCACCACCGCCACACCCTCCACTCCCAGCCTAACATCTATCACCTCCAATCACACCACCATCAACAACAATACTGCTCGTAAATGCAAAGGCAAAGGTGGCCCCGACAACAACAAATTTAGGTACCGCGGCGTCAGACAACGAAGCTGGGGCAAATGGGTCGCCGAGATCCGCGAGCCACGTAAGCGCACCCGCAAGTGGCTCGGCACCTTCGCCACCGCAGAAGACGCCGCCAGAGCCTACGACCGTGCCGCCCTCATCCTCTACGGCTCCCGTGCCCAGCTTAATCTCCAACCCTCCGGTTCTTCTTCTCACTCCTCCTCCTCTCGTACCACCTCTTCCTCTTCCACTCAAACCCTAAGACCCTTGCTTCCTCGCCCCTCGGGCTTCGCTTTCAATTTTCCCTTCCACGCCGCCGCCCTTCCCTACCCCTGCGCCGCCGCGTATGCCACCACCTTCAATTACACCCCGCAGGCACTGTGCCCTAATGAGAATAGCAATAATACAGTGCATGCTCATCGTCATCATCACCATCGTCGACCTGAGGAAGTGGTGCAAGTGCCACATGCTTTATCAACATCATACCCAAAGTCGGAATCCGATGTGAGTTTAGATGGGAATAATACTACTGTTAATAGCTCCAGTAGATCAACCTCGTACCAAAGACATGGTTTCCAGGATAATAACCGTTTGCATGTGCAACATGACCATTCCTCGAATCATCAGCAACATCAGAAAGGCGATGTGGATGGAGTTGATTCCGTTGTGGGTTCGGCGGAGGGTTCTCAGGCAAATATGGAGGCTTCCGAGGATCCAGATCTGTCGTTGGTGGGGACAGTGGGGCTTGGATCTTCTTCGTCCCTGTGGCCTTTGGCGAGTGAGGACGATTACACTGATAATTTGTGGGATTATAATGATCCTTTCTTCTTTGATCTTTAG 981 0.5321 MASLQPQPQDTKPTVTTATPSTPSLTSITSNHTTINNNTARKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSGSSSHSSSSRTTSSSSTQTLRPLLPRPSGFAFNFPFHAAALPYPCAAAYATTFNYTPQALCPNENSNNTVHAHRHHHHRRPEEVVQVPHALSTSYPKSESDVSLDGNNTTVNSSSRSTSYQRHGFQDNNRLHVQHDHSSNHQQHQKGDVDGVDSVVGSAEGSQANMEASEDPDLSLVGTVGLGSSSSLWPLASEDDYTDNLWDYNDPFFFDL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01549 326 SUPERFAMILY DNA-binding domain 55 112 IPR016177 GO:0003677
Vian7g01549 326 MobiDBLite consensus disorder prediction 111 136 - -
Vian7g01549 326 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 29 272 - -
Vian7g01549 326 MobiDBLite consensus disorder prediction 205 236 - -
Vian7g01549 326 MobiDBLite consensus disorder prediction 1 41 - -
Vian7g01549 326 MobiDBLite consensus disorder prediction 249 290 - -
Vian7g01549 326 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Vian7g01549 326 CDD AP2 55 112 IPR001471 GO:0003700|GO:0006355
Vian7g01549 326 Pfam AP2 domain 55 104 IPR001471 GO:0003700|GO:0006355
Vian7g01549 326 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Vian7g01549 326 Gene3D AP2/ERF domain 54 112 IPR036955 GO:0003700|GO:0006355
Vian7g01549 326 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Vian7g01549 326 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Vian7g01549 326 MobiDBLite consensus disorder prediction 1 55 - -
Vian7g01549 326 MobiDBLite consensus disorder prediction 180 236 - -
Vian7g01549 326 FunFam Ethylene-responsive transcription factor 2 55 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01549 Vian-Chr7 24318110 24319090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01549 41 326 AP2-EREBP Transcription Factor Family AT2G40220 41.615 1.32e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian7g01549 AP2 6.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01549 K09286 - gmx:100779779 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01549 7 24318110 24319090 Vian7g01549 7 24318110 24319090 ECH