Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01548 ATGGGAACTTCCGTGCGTGTAAAAGAAGCATCGGTGATTACACCTTCTGAGCCCACTCCACGCTGCGTGCTCGCTCTATCAGCGCTTGATTCGCAACTCTTCCTTCGTTTCACCATAGAGTATCTGTTAGTCTACAAGCCCTCCCCTGGGCTGGACCAGCCTAACACCACGGCCCGTCTAAAATCGGCATTAGCCAAAGCCCTGGTTCCCTACTACCCCTTCGCGGGCAGGGTCAGGCCCAAGCCCGATGGCCCGGGCCTGGAGGTGGTGTGTGCGGCCCAAGGCGCGGTGTTCATAGAAGCCTTCGCTGTCCGTTACAAGGCCAACGACTTTGAAAAAGCGCCTAAAACAGTTGCGCAATGGAGGCCGTTGTTGTCGCTCCACGTGGCAGACGTGCTCAAGGGATCCCCGCCGCTGGTGGTTCAGCTGACCTGGCTCGTCGACGGCGCCGCCGCTATAGCCATCGGGATCAACCACTGCCTCTGCGACGGCATCGGCAGCGCGGAGTTTCTCAACCACTTCGCCGAGTTGGCCAACGAGAGACTCGAGACGAGTTACATGCGCATACAGAAACCGGTTTGGGAGCGTCACCTTCTGAAACCACCGCGCGGGGAGGAGACGCGGGTGGATTCAGCCAGTCATCCCGAGTTTAGCCGAGTCCCGGACCTATGCAGCTTCATGAACAAGGTCTCGACCGGGCTAAAACCAACGTCGATTACGTTCGACAAGACGCGGCTGAACGAGTTAAAGCGAGTGGCGCGGTCCACGAGCGAAGACGGCGAGGCGGCGCGGTACACTTCGTTCGAGGTACTGGCGGCGCACGTGTGGAGAAGCTGGGCGAGAGCTATAGGGTTTCCGGGGAACCAGAAACTGAAGCTGGTGTTCAGTATAAACGTGCGGAACCGTTTGAAGCCGGGTTTGCCCGAGGGGTATTACGGGAACGCGTTTGTTTTGGGGTGTGCGGAGACGAGTGCGAGGGAGTTGGAAGAGGGAGGGGTGGGGTTCGGGTCGGGTTTGGTGAAGCGGGCTAAGGAGAGGGTGGGGAAGGAACACGTGAGGGAGGTGATGGAGTGGGTCTGGGAGAGGAAAGGGTGCCCCGACCCGGTTGGGGTGTTGATAGTGTCGCAGTGGTCGAGGCTGGGGTTGGAGAATATTGACGTGGGTTTGGGAAAGGCTTGGCACGTGGGACCCGTGTGCTGCGATAGGTACTGTTTGTTCTTGCCGGTGAGAGATGAGTGTGTTAGTGTGAAGGTCATGGTCGCTGTCCCCACTTCCGCCGTTGACAATTACCACCTTTTCATGCGTTCCTCTCACCTCTGA 1320 0.5864 MGTSVRVKEASVITPSEPTPRCVLALSALDSQLFLRFTIEYLLVYKPSPGLDQPNTTARLKSALAKALVPYYPFAGRVRPKPDGPGLEVVCAAQGAVFIEAFAVRYKANDFEKAPKTVAQWRPLLSLHVADVLKGSPPLVVQLTWLVDGAAAIAIGINHCLCDGIGSAEFLNHFAELANERLETSYMRIQKPVWERHLLKPPRGEETRVDSASHPEFSRVPDLCSFMNKVSTGLKPTSITFDKTRLNELKRVARSTSEDGEAARYTSFEVLAAHVWRSWARAIGFPGNQKLKLVFSINVRNRLKPGLPEGYYGNAFVLGCAETSARELEEGGVGFGSGLVKRAKERVGKEHVREVMEWVWERKGCPDPVGVLIVSQWSRLGLENIDVGLGKAWHVGPVCCDRYCLFLPVRDECVSVKVMVAVPTSAVDNYHLFMRSSHL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01548 439 Gene3D - 1 218 IPR023213 -
Vian7g01548 439 PANTHER ACYL TRANSFERASE 4 3 432 - -
Vian7g01548 439 Gene3D - 227 431 IPR023213 -
Vian7g01548 439 Pfam Transferase family 4 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01548 Vian-Chr7 24298153 24299472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01548 5 434 Monolignol Biosynthesis Gene Families AT5G48930 25.225 4.38e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01548 - - gmx:100817048 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01548 7 24298153 24299472 Vian7g01548 7 24298153 24299472 ECH
Vian2g03020 2 50879714 50881012 Vian7g01548 7 24298153 24299472 PCT