Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01544 ATGGAAAAGAACAGGAAACTCAGCCGCTTGCAGGATCTTTGTATAGCTTCGCGCCTTGTGGCGGTTTTTTTCTTGTTTCAGAGTTTGGGTTTGTGTTGTTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTCAGGCAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTGGATGATGATTCATCTTTTGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTCGCCTTTTTCCTCTGTTTTGAAATTGACTTGAGTGATTTTGTGCTCAGGAATTTGAAGGATCTCTGCCTTGAAGGAACTCTGGCACCTGAGCTTGCGAAACTTATCCACATAAATTCCATTATTTTACGGAACAACTCTTTCTCTGGGACCATCCCTGAAGGATTTGTGGAGTTAAAAGAATTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGACATCTACCTGCTGATCTTGGGAGCAATATCTCACTAGCAATCCTCTTGTTGGATAACAATGAATTTCTTGTTGGTTTCTCACCGGAAATTAATGAACTGAGGCTGCTTTCTGAGTGCCAAGTGGGTGAAAATCAGCTAACTAATGCTGCTAAAATGCCAGCGTGTATAGAAAGAGCCACCACATGGCATATTGGTCAAGGTAAAGGTATTGCTCGTGGCCTACTGCAACTTAAAAAACCATTTCATCGTACTCATGAAGATCCTCGTAATCGTGCGGCTAATCCACCACAAGAGAAGCCTTCACTTCCTTCTCCTCCTTCACCAGTGCCAAAGCTATCTCCCCCTGAGAAAAGTGCTTCTAAGTCTCCTACTCCACATTCTACACCAGGTTCTCGAGCACTACCTAAAACTGAAAAAAGCACTTCACCAAAGGTTCATATTTTGGTTGGAGTTATAGGTGGTGCAGTGTTTCTTCTTTTTTCAACCATTGGCTTATATATTTGTAAAACAAAGGTGGTTAATGTCAGACCTTGGGCCACGGGACTAAGTGGACAGCTGGAGAAGGCATTTGTAACTGGCGCTCAAAAGCTAAGGAGATTGAATCTTGAAGTAGCATGTGAAGATTTTAGTAATGTAATCGGTACTTCACCTATTGGCACAGTGTACAAAGGAACTTTGTCTAGTGGCGTTGAAATTGCTGTAACTTCTGTTCCGGTGACATCATCCAAGAATTGGTCAAAGACTTTAGAAGTTCAATTTAGAAACAAGATAGATACATTATCGAAAGTGAACCACAAGAATTTTGTAAATCTTATTGGATACTGTGAAGAGGAGGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCCCCAAATGGAACACTATTTGAGCATTTACACATAAAAGAGGCTGAGCACTTGGATTGGGTAACAAGGCTTAGAGTTGCAACGGGTATGGCTTATTGCTTGCAGCATATGCACCAATTGGACCCTCCTATGGCCCTTATCAAGCTGAATTCTCAAACTGTTTACTTGACTGATGATTATGCTGCCAAACTCTCAGATTTTAGTTTTTCCTATGAAATAACCTCAGCTGAGACAAAAGCCATTGACATGCCAAAAGCAAGTCTAGAAACTAACGTTTATAGCTTTGGTGCTTTGTTATTTGAGATGGTTACTGGTCGTCTCCCTTATTCAGTGGAACAAAGGGACTCCCTTGAAAACTGGGCATCACACTATTTACAAGGAGACCAACCTCTCAGGGATATGGTGGATCCAATTCTTGAATCTTACCAAGAGGATCAGCTTGAACAAGTTGCTGCATTGATTAAATCTTGTGTGCATCCAGATCCAAAGCAGAGACCAATAATGAAAGATGTCAGTGAGAAGCTAAGAGAGATAACAAAGATAACACCCGAATCAGCAGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCTACAGAAGTGCGTTGA 1956 0.4141 MEKNRKLSRLQDLCIASRLVAVFFLFQSLGLCCSLNEEGNALLKFRQRIVSDPFGALSNWVDDDSSFDPCNWFGVECSDGRVVAFFLCFEIDLSDFVLRNLKDLCLEGTLAPELAKLIHINSIILRNNSFSGTIPEGFVELKELEVLDLGYNNFSGHLPADLGSNISLAILLLDNNEFLVGFSPEINELRLLSECQVGENQLTNAAKMPACIERATTWHIGQGKGIARGLLQLKKPFHRTHEDPRNRAANPPQEKPSLPSPPSPVPKLSPPEKSASKSPTPHSTPGSRALPKTEKSTSPKVHILVGVIGGAVFLLFSTIGLYICKTKVVNVRPWATGLSGQLEKAFVTGAQKLRRLNLEVACEDFSNVIGTSPIGTVYKGTLSSGVEIAVTSVPVTSSKNWSKTLEVQFRNKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWVTRLRVATGMAYCLQHMHQLDPPMALIKLNSQTVYLTDDYAAKLSDFSFSYEITSAETKAIDMPKASLETNVYSFGALLFEMVTGRLPYSVEQRDSLENWASHYLQGDQPLRDMVDPILESYQEDQLEQVAALIKSCVHPDPKQRPIMKDVSEKLREITKITPESAVPKLSPLWWAELEIASTEVR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01544 651 FunFam Inactive receptor-like serine/threonine-protein kinase 337 445 - -
Vian7g01544 651 MobiDBLite consensus disorder prediction 273 294 - -
Vian7g01544 651 FunFam Leucine-rich repeat receptor-like kinase 38 178 - -
Vian7g01544 651 ProSiteProfiles Protein kinase domain profile. 363 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01544 651 MobiDBLite consensus disorder prediction 254 269 - -
Vian7g01544 651 Gene3D Ribonuclease Inhibitor 34 220 IPR032675 -
Vian7g01544 651 MobiDBLite consensus disorder prediction 241 295 - -
Vian7g01544 651 PANTHER PROTEIN MALE DISCOVERER 2 15 649 - -
Vian7g01544 651 SUPERFAMILY Protein kinase-like (PK-like) 351 620 IPR011009 -
Vian7g01544 651 Pfam Protein tyrosine and serine/threonine kinase 366 620 IPR001245 GO:0004672|GO:0006468
Vian7g01544 651 Gene3D Phosphorylase Kinase; domain 1 340 445 - -
Vian7g01544 651 Gene3D Transferase(Phosphotransferase) domain 1 446 632 - -
Vian7g01544 651 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Vian7g01544 651 SUPERFAMILY L domain-like 37 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01544 Vian-Chr7 24265021 24268344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01544 20 624 Receptor kinase-like Gene Family AT3G02880 26.586 3.84e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vian7g01544 PK_Tyr_Ser-Thr 4.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01544 - - gmx:100792450 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03025 2 50915430 50919205 Vian7g01544 7 24265021 24268344 PCT