Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01535 ATGCTTCTCCGAACCGCTGCTGCTTCGTCACTCTCCCTCTTGAACCCCAACGCCGAACCTTGGCGTTCGGTTCCCGTTCAGGCGAACAACGCCAGCCGCTTGGTGGTCCGTGCCGCGAAAGGATCCACGAACCACCGCGCCCTAACTGGCGTGATTTTTGAACCGTTCGAGGAGGTGAAGAAGGAGCTAGATCTCGTTCCCACCGTTCCTCAAGCTTCTCTCGCGCGCCAAAAATACGTTGACGAATCTGAAGCCGCCATTAACGAACAAATCAAGTTGCTCTTCTCTCTCTTTCTCATCGGTTTCATCTCACTTTGTCATTACATCGTTCTGATTGTCGTTTATGGATGCAGTGTGGAGTATAATGTTTCGTACGTGTATCATGCTCTGTTTGCGTACTTCGATAGGGATAACGTTGCGCTGAGAGGTCTTGCTAATTTTTTTAAGGAATCGAGTGAAGAAGAACGAGAGCATGCTGAGAAATTGATGGAATATCAGAACAAGCGTGGTGGAAAAGTGAAGTTGCAGTCAATTGTGATGCCGCTTTCTGAGTTTGATCATGCAGATAAAGGGGATGCACTGCACGCAATGGAACTGGCTCTCTCGTTAGAGAAGCTAACGAACGAAAAGCTCCTTCAGTTGCACAGTGTTGCCACGAAGAACGGTGATGTGCAGTTGTCAGACTTTGTCGAAAGCGAATTTCTGGTTGAACAGGTGGAATCCATCAAAAGAATATCTGAGTATGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTCCTCCATGAGGGAGGACTTGCAGCTTGA 831 0.4826 MLLRTAAASSLSLLNPNAEPWRSVPVQANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAINEQIKLLFSLFLIGFISLCHYIVLIVVYGCSVEYNVSYVYHALFAYFDRDNVALRGLANFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLQLHSVATKNGDVQLSDFVESEFLVEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGLAA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01535 276 Gene3D - 45 272 IPR012347 -
Vian7g01535 276 ProSiteProfiles Ferritin-like diiron domain profile. 103 256 IPR009040 -
Vian7g01535 276 ProSitePatterns Ferritin iron-binding regions signature 2. 223 243 IPR014034 -
Vian7g01535 276 CDD Euk_Ferritin 81 266 - -
Vian7g01535 276 Coils Coil 148 169 - -
Vian7g01535 276 FunFam Ferritin 111 272 - -
Vian7g01535 276 SUPERFAMILY Ferritin-like 71 270 IPR009078 -
Vian7g01535 276 PANTHER FERRITIN 118 270 IPR001519 GO:0006826|GO:0006879|GO:0008199
Vian7g01535 276 Pfam Ferritin-like domain 119 255 IPR008331 GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01535 Vian-Chr7 24170493 24173106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01535 K00522 - gmx:547477 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03028 2 50938119 50948688 Vian7g01535 7 24170493 24173106 ECH
Vian7g01535 7 24170493 24173106 Vian7g01535 7 24170493 24173106 ECH
Vian2g03028 2 50938119 50948688 Vian7g01535 7 24170493 24173106 PCT