Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01529 ATGGGTGCTTATGATCAAGTTTCTGTGCGGCCTTTGGATTCTTCTAGAAAGAGGAAAAGTAGGAGCAGAGGGGATGGTTCTAGATCTGTTGCTGAGACCATTGCAAAGTGGAAGGAATACAATGAGCATCTTTATTCTGGCAAAGATGATGGTAGATCAACTCGGAAGGCACCAGCTAAAGGGTCAAAGAAAGGATGTATGAAAGGGAAAGGAGGACCCCAGAACTATGAGTGTAACTACAGAGGGGTTAGGCAGAGAACTTGGGGGAAATGGGTGGGTGAGATTAGGGAGCCAAATAGAGGGAGTAGGCTTTGGTTAGGAACCTTTCCTACTGCCCAAGAAGCTGCTCTTGCCTATGATGAAGCTGCTAGAGCCATGTATGGTCCATGTGCACGCCTCAACTTCCCCCACATCTCAGATTATGCTTCTGTCAAGGAATCGTTTAAGGACTCTTTCTTGGCTGCTTCATCTTCATGTTCTTCGACAACATCGGACACTACTACTACTACTACATCCAATCGATCAGAGGTCTGTGCAGCTGAGGATGCTAAGGAGAATATTCTACCTGTCCTTGATAAGGCCAACCGTAATGATTGTCACAAGGCTTATGAACATGCCTCACCAACTAGCAGAATGAAGCTAGAGCCGAAGGATGAGGCTGTGGATCGCCTAGACCCGGGGGCTGGAGAAGGAATACATCATGTTGAGCAGGCAGAGGATGTAAATGAAGACCAGATGGACTTTTCGTGGATTGATGCTTTGGATTTTAATAATGATGATTACTCCAAGAGCTTTTCCAATGATGAGTTATTTCAGGTGGATGAACTTTTGGGGCTAATAGATAATAACCCAGTTGATGACTCTGCGTTGATGCAATGTTTGGATTTTGGACAAACAGGATTTCCTGGAGATAGTAATCCTCAGCTTGATAATACGTCATCAAGCTTTGTTTATCAGTTGCAAAATCCAGATGCCAAGTTGCTGGGAAGTTTGCCCCATATGGAACAGACACCATCTGGTTTTGATTATGGATTAGATTTCCTGAAACCAGTTGTACCAGAGGACTATAATGGTGTAGGGGAAGAACCGCAATTTCTTAACTTGGACGATGTTCTGAATCATGATTCAAAGGACATGCTAGAAAGCAAGGAATGA 1155 0.4416 MGAYDQVSVRPLDSSRKRKSRSRGDGSRSVAETIAKWKEYNEHLYSGKDDGRSTRKAPAKGSKKGCMKGKGGPQNYECNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFPTAQEAALAYDEAARAMYGPCARLNFPHISDYASVKESFKDSFLAASSSCSSTTSDTTTTTTSNRSEVCAAEDAKENILPVLDKANRNDCHKAYEHASPTSRMKLEPKDEAVDRLDPGAGEGIHHVEQAEDVNEDQMDFSWIDALDFNNDDYSKSFSNDELFQVDELLGLIDNNPVDDSALMQCLDFGQTGFPGDSNPQLDNTSSSFVYQLQNPDAKLLGSLPHMEQTPSGFDYGLDFLKPVVPEDYNGVGEEPQFLNLDDVLNHDSKDMLESKE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01529 384 CDD AP2 78 137 IPR001471 GO:0003700|GO:0006355
Vian7g01529 384 FunFam Ethylene-responsive transcription factor 2 78 137 - -
Vian7g01529 384 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Vian7g01529 384 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Vian7g01529 384 MobiDBLite consensus disorder prediction 1 31 - -
Vian7g01529 384 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 15 341 - -
Vian7g01529 384 ProSiteProfiles AP2/ERF domain profile. 79 136 IPR001471 GO:0003700|GO:0006355
Vian7g01529 384 MobiDBLite consensus disorder prediction 11 26 - -
Vian7g01529 384 MobiDBLite consensus disorder prediction 45 70 - -
Vian7g01529 384 Pfam AP2 domain 78 128 IPR001471 GO:0003700|GO:0006355
Vian7g01529 384 SMART rav1_2 79 142 IPR001471 GO:0003700|GO:0006355
Vian7g01529 384 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
Vian7g01529 384 Gene3D AP2/ERF domain 79 138 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01529 Vian-Chr7 24071552 24072706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01529 16 369 AP2-EREBP Transcription Factor Family AT2G40340 40.278 6.86e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian7g01529 AP2 3.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01529 - K09286 gmx:100800134 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01529 7 24071552 24072706 Vian7g01529 7 24071552 24072706 ECH