Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01526 ATGGGGACCAAGAACCTCACCTCAAATAAGCATTTTCAAAATGGGGTGAGGAATGTGGGAGATGCTCATTTTTTGCGCTTGTTTTTTCTTTTGTGGTTTATTGTGGTGGCAGTGTTTGGTGAAGAGCGTTGGGATGGGGTTGTTGTCACACAATCGAACTTCCTGGCACTCGAGGCATTCAAGCAAGAGTTGGTTGATCCCGAAGGCTTCCTGAGAAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGAGGTTGGGTTGGTATCAAGTGTGCCCAGGGACAGGTTATTGTGATCCAGCTTCCATGGAAGGGGTTGAAGGGGCGTATCACCGAGAGGATTGGCCAACTTCAGGGGCTAAGAAAGCTTAGTCTCCACGATAACCAAATTGGTGGGTTGATCCCTTCATCACTGGGAGTTCTTCTCAATCTGAGAGGGGTTCAACTCTTCAACAATAGGTTCACAGGCTCCCTCCCTCCTTCTTTAGGTTCATGTCCTTTGCTTCAGTCTTTAGACCTCAGTAACAATCTGCTCAGTGGGACAATCCCGATCAGTCTTGGGAATGCCACTAAGCTTTATTGGCTTAACTTGAGCTTTAATTCCTTCTCTGGCCCAATACCAACTACCTTAACTCGCTTAACTTCTCTCACTTACATATCTCTTCAACACAACAATCTCTCGGGTTCTATTCCTAACTCGTGGGGTGGTAGCTTCAGGAACCACGTCTTTCGCCTCCAAAATCTGATCCTAGATTATAACTTCTTTAGTGGCACCATTCCTGCTTCTTTGGGCAACTTGAGTGAACTCACAGAGATTTCTCTCAGTCATAACCAGCTTAGAGGACCTATCCCAAATGAAATTGGAAGCCTTTATAGACTTAAGACGGTAGATTTTTCTAGTAATGCATTGAACGGAAGCTTGCCCGCCACTCTCTCTAATGTGTCCTCTCTCACTCTCTTGAATGTAGAGAACAACCACCTAGGTAATCAGATCCCAGAAGCCTTGGGCAGATTGCACAATCTATCTGTTCTGGTTCTGAGCAGAAACCAATTCAGTGGCCATATTCCTCAGAGTATTGGAAACATGTCAAAGCTTACACAGCTTGATTTGTCAATGAATAATCTCAGTGGAGAAATTCCAGCATCCTTTGAAGATCTGAGTGGTCTTAATTTCTTCAACGTTTCTCATAACAACCTCTCTGGTCCGGTTCCAGCCCTACTTGGGCATAAATTTAATTCAAGCTCATTTGTGGGAAATATTCAGCTATGTGGATATAGCCCTTCAACCCCATGTCCCTCGCCAGCTCCTTTTGGTTCACCTAAAGAAAAATCAGAAAACCATCGACACAAGAAACTAGGCACCAAAGACATAATTCTCATAGTAGCAGGAGTGCTCCTTGTTGTCCTGGTAACACTTTGCTGCATTCTGCTATTCTGCCTGATCAGAAAAAGAACAGCATCGAATGCAGAGGGTGGCCAGGCCACAGGGAGAGCATCTGCATCTGCTGCCACGACAGAAAAAAGAGTCCCTCCTGTCGCAGGTGAAGCTGAAGCTGGTGGTGGTGAGGCCGGAGGTAAACTAGTCCACTTTGATGGACCATTGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGTACGTATGGAACTGTTTACAAGGCTACATTAGAGGATGGAAGTCAAGCTGCAGTTAAACGATTGAGGGAAAAGATTACGAAAGGTCAAAAAGAATTCGAATCTGAAGTTAGTATTATAGGAAGAATTCGACACCCAAATCTTCTGGCATTGAGAGCCTATTACTTGGGACCCAAAGGAGAAAAGCTTCTAGTATTTGATTACATGCCTAAGGGAAGTCTTGCTTCTTTCCTACACGCTCGTGGGCCCGAAACAGCCATTGATTGGCCAACAAGGATGAAAATAGCGCAGGGAATGGCTCAACTCCTAACGGGGAAGCCACCTGGTGAGGCTTTGAATGGCGTGGATTTACCTCAATGGGTTGCCTCCATTGTCAAAGAGGAGTGGACAAATGAAGTTTTCGATGTAGAGTTGATGAGAGATGCTTCAACATATGGCGACGAAATGCTGAACACGTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTCCAGCAAGTCCTTCAGCAGCTTGAAGAGATTAGACCGGAGATATCAGCCAGTTCGGGTGACGATGGAGCCATCCCTTCCACCAGTGAATGA 2253 0.4563 MGTKNLTSNKHFQNGVRNVGDAHFLRLFFLLWFIVVAVFGEERWDGVVVTQSNFLALEAFKQELVDPEGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGRITERIGQLQGLRKLSLHDNQIGGLIPSSLGVLLNLRGVQLFNNRFTGSLPPSLGSCPLLQSLDLSNNLLSGTIPISLGNATKLYWLNLSFNSFSGPIPTTLTRLTSLTYISLQHNNLSGSIPNSWGGSFRNHVFRLQNLILDYNFFSGTIPASLGNLSELTEISLSHNQLRGPIPNEIGSLYRLKTVDFSSNALNGSLPATLSNVSSLTLLNVENNHLGNQIPEALGRLHNLSVLVLSRNQFSGHIPQSIGNMSKLTQLDLSMNNLSGEIPASFEDLSGLNFFNVSHNNLSGPVPALLGHKFNSSSFVGNIQLCGYSPSTPCPSPAPFGSPKEKSENHRHKKLGTKDIILIVAGVLLVVLVTLCCILLFCLIRKRTASNAEGGQATGRASASAATTEKRVPPVAGEAEAGGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQKEFESEVSIIGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPETAIDWPTRMKIAQGMAQLLTGKPPGEALNGVDLPQWVASIVKEEWTNEVFDVELMRDASTYGDEMLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPEISASSGDDGAIPSTSE 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01526 750 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 239 434 - -
Vian7g01526 750 MobiDBLite consensus disorder prediction 490 520 - -
Vian7g01526 750 PRINTS Leucine-rich repeat signature 266 279 - -
Vian7g01526 750 PRINTS Leucine-rich repeat signature 168 181 - -
Vian7g01526 750 Gene3D Transferase(Phosphotransferase) domain 1 539 652 - -
Vian7g01526 750 SUPERFAMILY L domain-like 90 425 - -
Vian7g01526 750 Pfam Leucine rich repeat N-terminal domain 55 91 IPR013210 -
Vian7g01526 750 Gene3D Ribonuclease Inhibitor 165 239 IPR032675 -
Vian7g01526 750 SUPERFAMILY Protein kinase-like (PK-like) 547 732 IPR011009 -
Vian7g01526 750 SMART LRR_typ_2 314 338 IPR003591 -
Vian7g01526 750 SMART LRR_typ_2 213 236 IPR003591 -
Vian7g01526 750 SMART LRR_typ_2 266 290 IPR003591 -
Vian7g01526 750 SMART LRR_typ_2 362 385 IPR003591 -
Vian7g01526 750 SMART LRR_typ_2 117 140 IPR003591 -
Vian7g01526 750 SMART LRR_typ_2 141 165 IPR003591 -
Vian7g01526 750 FunFam Leucine-rich repeat receptor-like protein kinase 528 619 - -
Vian7g01526 750 Gene3D Ribonuclease Inhibitor 53 164 IPR032675 -
Vian7g01526 750 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 253 652 - -
Vian7g01526 750 Gene3D Ribonuclease Inhibitor 240 435 IPR032675 -
Vian7g01526 750 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 164 238 - -
Vian7g01526 750 MobiDBLite consensus disorder prediction 731 750 - -
Vian7g01526 750 Pfam Leucine rich repeat 340 399 IPR001611 GO:0005515
Vian7g01526 750 FunFam Leucine-rich repeat receptor-like kinase 52 163 - -
Vian7g01526 750 Gene3D Transferase(Phosphotransferase) domain 1 653 742 - -
Vian7g01526 750 ProSiteProfiles Protein kinase domain profile. 543 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01526 750 Pfam Protein tyrosine and serine/threonine kinase 546 653 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01526 Vian-Chr7 24045773 24048377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01526 652 733 Receptor kinase-like Gene Family AT3G51740 79.268 6.26e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vian7g01526 PK_Tyr_Ser-Thr 1.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01526 - - gmx:100811174 1019.61