Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01516 ATGAAGATTGCATCTCACTCCGACATCACTGAAGCAGTCCAGCCTCTCCTGTCGCCGGAATGCGAGCACTCGGCGGAGGATCGGGGTGCGCCGAATGGGTCAATCAGCGGAGCGGTGTTCAACATATCGACGACCATGATCGGTGCCGGAATCATGTCGGTTCCGGCGACGATGAAGGTGCTGGGCATAGTTCCGGGGTTCCTGGTGATCCTGTTGGTGGCACTTGTAACAGATGTGACCGTGGAATTTATGCTGAGGTACACGAGTTCCGGAAAATCCACTACTTACGCGGGCATGATGGGGGAATCGTTTGGGTCCGTTGGATCCCTCGCCGTTAAGATTTGCGTTCTCATAACCAATTTCGGAATCCTCATTATATATCTCATTATTCTAGGAGACGTGCTGTGTGGAAATGAGTCCAACGGAACTACACACTTGGGTGTTCTACAAGAATGGTTTGGCATCCATTGGTGGACCTCTCGTGCTTTTACTCTTCTTATTATTGCTCTCTTCATAATGCTTCCACTCGTTATGTTACGTCGTGTTGATTCACTGAGGTATACTTCTGCAATATCAATCCTACTAGCATTGGTCTTTCTTGCAATATGCTCATCAATGGCGTTTAGTGCATTGTTGTCCGGCAAAACTCAATCACTAAGGATGGTGCCTGATTTCTCTCTAGTCACTGTCCTTGATCTTTTCACCACTATCCCCGTCTTTGTCACTGGTTTCGGATTCCATGTCAATGTTCATCCAATTAGAGCAGAGATTGGAAAAGTTACACACATGGGTAAGGCTGTGAAGATTTCATTAGTAATATGCGTGGTTGTTTACTTTGCCATTGGCTTCTTTGCGTACCTATTATTTGGGGACTCCATCATGCCCGATGTGTTAGTAAACTTTGATCAAAACTCCAATACCCATGTTGGTCGATTGCTGAATGATATTGTTAGAATAAGCTATGCACTCCATCTTGCCCTTGTCTTCCCCATCATGAACTATTCCTTGAGGATCAACATAGATGAACTTATTTTCTCAAACAAAAATAAACCTCCCTTGGCTTCAGACACCCCAAGATTTGTGTCACTCACTTTGTCTTTGCTAGTCCTCACATACTTGGTGGCTGTTGCCATCCCAAACATTTGGTATTTCTTCCAGTTCTTGGGATCCACAACCGTTGTTTGCACCTCATTCATCTTTCCTGCTGCAATAGTTCTAAGGGACATGCATGGCATATCAAAGACAAAAGATCGAGTCATTGCAATTTCGGTCATTGTTTTTGCTGTTGGGACAAGCGGAATTGCTATATGGACCAACTTGAATCCAGGGGATGGTTAA 1338 0.4499 MKIASHSDITEAVQPLLSPECEHSAEDRGAPNGSISGAVFNISTTMIGAGIMSVPATMKVLGIVPGFLVILLVALVTDVTVEFMLRYTSSGKSTTYAGMMGESFGSVGSLAVKICVLITNFGILIIYLIILGDVLCGNESNGTTHLGVLQEWFGIHWWTSRAFTLLIIALFIMLPLVMLRRVDSLRYTSAISILLALVFLAICSSMAFSALLSGKTQSLRMVPDFSLVTVLDLFTTIPVFVTGFGFHVNVHPIRAEIGKVTHMGKAVKISLVICVVVYFAIGFFAYLLFGDSIMPDVLVNFDQNSNTHVGRLLNDIVRISYALHLALVFPIMNYSLRINIDELIFSNKNKPPLASDTPRFVSLTLSLLVLTYLVAVAIPNIWYFFQFLGSTTVVCTSFIFPAAIVLRDMHGISKTKDRVIAISVIVFAVGTSGIAIWTNLNPGDG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01516 445 Pfam Transmembrane amino acid transporter protein 33 434 IPR013057 -
Vian7g01516 445 PANTHER AMINO ACID TRANSPORTER 27 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01516 Vian-Chr7 23964380 23967086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01516 9 440 Amino Acid or Auxin Permease AAAP Family AT3G56200 52.765 1.51e-156 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01516 - - gmx:100794031 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01516 7 23964380 23967086 Vian7g01516 7 23964380 23967086 ECH
Vian2g03046 2 51122586 51124823 Vian7g01516 7 23964380 23967086 PCT