Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01477 ATGATTTCCCACCACAATGGAAACCATCCCTTTCTTTTCTTCCATGGTTCATATAAAAAACCCCTAACAACACGAAACCCGTTTCCCCTTTCTCCCAAAGTTCCAAGCTTTCCTAGTTCTACGGCTACCCTTGTTCTTCAAGTCTCAAGGGTGCATTTCATTCACTCACACTTTTCTGTGAAACGATTATCTCGGCAGGTAAAGGGGAAAGTGCAGGATGTGCTGTTAGATTACTTGCATTCGAGCCGGGGATACAGCTTCTTGGATGCTGAGTTCATTAGCAAAAATTCACCATCTTTTGTTCAAGGTTTGGTGTCAGAGTTTCGTGGACAAGATGATGATGTTGCCACTTGTTTGAGGAAGTGGCTGTGGTACAACCCCATTAATGAGTTTGAACCATTCTTTGAGAGTTTGGGGATTAGCCCTCGTGAGTTGCCTTTGTTTCTCCCACGTGGTATGATGTATTTGTCTGATGATCATGTTATGCTTTCCAATTTCCACGTTTTTAGTAATTATGGAGTTCCAAGGAATAGGGTAGGGAAGATTTATCGAGAGGCAAAGGAGGTTTTCGGGTATTCTAATGGATTGCTGTTGTCGAAATTTCGAGGTTATGAAAAGTTAGGTTTGAGTAGATCCATGGTCATCAAGCTTGTTGTTTGTTGCCCTTCACTTTTGGTTGGTGAAACAAGTGTTGAATTGGCCATGGTTCTGGATTGGTTGAAGAAAATTGGTATTGGACATGATTGGATTGGGAATTACATGTCTTGTTTGAAAACATATGACCCAAGAAAAATGCTTGATGCTATACAATTTTTTCATAAAGTTGGTTATTCTGAAGAACAGATGCACAATTTCTTCAAGGAAAACCCCGCATTATTACTGGAAGGTCTTGAGAAGAAGGTGTATGTGTTTTTGGGTCTAGCATTTAAGTTAGATCTCAATAGGAATGCAATTTATTCTTGTTTTGTTGAATATCCTCATATCTTGACTAAGAAGTGTGGAAAAAATCTTTTGGGAGTGATTGGCTTTTTGCATTATGTTGGAATGGATATAGATGACATTTCGCGTATCTTGTCTAACCACATGCATCTCCTGAGCTCACATCCCTTGAAAGGCCCTAAAGCTGTTTGTTCGCAGTTAAAACTTAGAAAAGCTGATCTATGCCAAATCATAAAGGATGATCCACTGAAGCTAGTTAGTTTGGCTTCAAAACTGAAACAGAATTCTAATTTACAGTTATTACGTGACGACCCAAGTAAACATTTGGAGAAAACAACATTCTTGCTGAAGTTGGGATATGCTGAGAACTCTGAGGAGATGGCAAAAGCAATAAAAAGATTCCGAGGGAGAGGTGATCAATTACAGGAGAGGTTTGATTGCCTTGTTGAAGCTGGTTTGGACTATAACATTGCACTCAAAATGATAAAATGTGCTCCTATGATTCTAAACCAGAACAAAGTTGTGATTCAAAAGAAGATTGATTTCTTAAGAAACATTTTAGGTTACCCATTGGAGTGCGTCGTGGCATTTCCGGCATACTTGTGTTATGATTTAGAGAGAATCATGCTCAGATTTTCAATGTATGCTTGGGTGGCAGAAAGGAAAGCAGCAAAACCTATGATGGCCTTGAGCACTATCCTCGCATCCTCTGATGAAAAGTTTGTAAAATACATTGTGAATGCACATCCTGAAGGTCCAATCATCTGGGATGGTCTAAAGAAGTTATTGCAAGATAAGAGCCAGCTCTTCCCTTAA 1755 0.3937 MISHHNGNHPFLFFHGSYKKPLTTRNPFPLSPKVPSFPSSTATLVLQVSRVHFIHSHFSVKRLSRQVKGKVQDVLLDYLHSSRGYSFLDAEFISKNSPSFVQGLVSEFRGQDDDVATCLRKWLWYNPINEFEPFFESLGISPRELPLFLPRGMMYLSDDHVMLSNFHVFSNYGVPRNRVGKIYREAKEVFGYSNGLLLSKFRGYEKLGLSRSMVIKLVVCCPSLLVGETSVELAMVLDWLKKIGIGHDWIGNYMSCLKTYDPRKMLDAIQFFHKVGYSEEQMHNFFKENPALLLEGLEKKVYVFLGLAFKLDLNRNAIYSCFVEYPHILTKKCGKNLLGVIGFLHYVGMDIDDISRILSNHMHLLSSHPLKGPKAVCSQLKLRKADLCQIIKDDPLKLVSLASKLKQNSNLQLLRDDPSKHLEKTTFLLKLGYAENSEEMAKAIKRFRGRGDQLQERFDCLVEAGLDYNIALKMIKCAPMILNQNKVVIQKKIDFLRNILGYPLECVVAFPAYLCYDLERIMLRFSMYAWVAERKAAKPMMALSTILASSDEKFVKYIVNAHPEGPIIWDGLKKLLQDKSQLFP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01477 584 SMART mt_12 504 535 IPR003690 GO:0003690|GO:0006355
Vian7g01477 584 SMART mt_12 180 210 IPR003690 GO:0003690|GO:0006355
Vian7g01477 584 SMART mt_12 319 350 IPR003690 GO:0003690|GO:0006355
Vian7g01477 584 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Vian7g01477 584 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Vian7g01477 584 PANTHER CGI-12 PROTEIN-RELATED 75 560 IPR003690 GO:0003690|GO:0006355
Vian7g01477 584 Gene3D Transcription termination factor 3, mitochondrial 303 565 IPR038538 -
Vian7g01477 584 Gene3D Transcription termination factor 3, mitochondrial 124 302 IPR038538 -
Vian7g01477 584 FunFam mTERF family protein 109 259 - -
Vian7g01477 584 Pfam mTERF 451 554 IPR003690 GO:0003690|GO:0006355
Vian7g01477 584 Pfam mTERF 269 409 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01477 Vian-Chr7 23506924 23508678 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian7g01477 mTERF 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01477 - - aprc:113846643 897.116