Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01468 ATGGAGGCATTGGGGCGCTTCTGCGTCGTGGCTTGCGCGAGGTGGTGCTCCTGTGAAGATGCTTCACGGTGGCGTGGACTGTGGCTGAACCGGGAGAAGCGAATCGTTGGGGCGATCCCTGGGATTTTGGTGGGGGATTTGTTCCTTTTCATAATGGAGTTGTGTGTGCTTGGGTTGCATGGTCAGATGCAGGCTGGCATTGATTATCTTCCTGCAAGTATGAGCTCTAGTGGGGGTAAGGGTTATTCGTGGGATGAGGGGAAATCTGGTTTTGGGGTTTACAAGTTTAGGCTTTCCAGGATTGAGGGGCAGGCTGAGATGGGAAGTGTTATTTTGAAGGAAGCTAGGAATATTAGGAGGGATGATGATCGAGATCCCCTTAACTATGAGTATCTTGCCATGACAAGTTTTCCACAGTTTGTGTTTCATCAGAGTGGGAATGTTACTGGTTGTGACTGTGTGAATGGTTGTGGTGATGGATGCTTTTGTGCTATGAAAATGGGGGTGATTTTCCTTACACTCTACAGGGACATCTTGTGA 540 0.487 MEALGRFCVVACARWCSCEDASRWRGLWLNREKRIVGAIPGILVGDLFLFIMELCVLGLHGQMQAGIDYLPASMSSSGGKGYSWDEGKSGFGVYKFRLSRIEGQAEMGSVILKEARNIRRDDDRDPLNYEYLAMTSFPQFVFHQSGNVTGCDCVNGCGDGCFCAMKMGVIFLTLYRDIL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01468 179 SUPERFAMILY PUA domain-like 26 116 IPR015947 -
Vian7g01468 179 Gene3D - 19 82 IPR036987 -
Vian7g01468 179 SMART G9a_1 32 104 IPR003105 -
Vian7g01468 179 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 25 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01468 Vian-Chr7 23352263 23352974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01468 25 94 Su(var)3-9 homologs AT5G04940 37.975 1.85e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01468 K11420 - pvu:PHAVU_003G282200g 129.798