Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01454 ATGGTCTTCACTGTGCTTTCAGTAGCTCTCTGTTCACTGTTAGGCCTCCATTTTTTCACCATTTTTTCTTCTGCTGCCACCATTGATGAAAACCAAGTGAGGGAAGCAGGTGCTTTACTTGAGTGGAAAGCTAGCCTTGACAACCAAAGCCAAGCTTCTCTGTCTTCATGGACTGAAGGTGTGAATCATTGCAAGTGGAAAGAAATCATTTGTGACAAATCCAACTCTGTCACCACTATAAATGTAGCAAATCATGGCCTAAAAGGTACTCTTCACACTCTCAACTTCTCATCTTTTCCAAACCTGCTAACTCTGGATGTCAGTAACAACAGTTTCAGTGATACTATTCCTCAACAAATTGCTAACCTGTCCAGAGTTTCTGAGTTGATAATGAATAAAAACAATTTTAGTGGTCCAATCCCCATTTCCATGACCAAGTTGGCCAACTTGAAGATTCTAAACTTGAAATACAATAACATTTCTGGCCCTCTTCCTGAAGAGATTGCAGAATTGAGGAACTTAGAGAGTCTGTTATTTGAATCAAATCACCTTTCTGGTACCATTCCTCCAACAATTGGAAGGATGGCCAACCTTGTCGAACTTAATCTGCAACTCAACTCTATCAATGTTTTGCATACCAACAAACTTGAAGGCCGATTACCACCAGGAATGAATAACTTCACCAATTTAATAAGCTTACAACTAGCTGGAAATAGTTTCACTGGCCCTCTGCCCCAACAAATTTGCCTTGGTGGGTCACTAACGTCTCTCAGTGCTGAAGGTAATAATTTCACGGGTCCAGTTCCAAAAAGCCTGAAAAATTGCTCCAGTCTTATGAGACTCAAACTAGAAGGAAACCGGTTGAGTGGAAATATATCAGATGATTTTGGTGTTTATCCATTGTTGAATTACATTGATCTGAGTGGGAATAATTTTTACGGCGACATTTCTCCAAATTGGGCAAAGTGTCCTAGTCTCTCAAGCCTTATAATGTCCAACAACAACTTAACCGGTAGTATACCACCAGAACTCAGCCGGGCACCCAGGTTAGCAGATCTTAACTTGTCTTCAAATCATTTAACTGGGAGAATTCCAAAAGAACTCGGGAAGCTGACATCTTTATTGAAGCTATCAGATGGCTTGGCAAAGATTGACATATCTAACAACCAATTGGAGGGTCCAATTCCTAACAGTCGGGCCTTTCGCAATGTTTCATTTGATGCATTGAAAGGTAATAAAGGCTTGTGTGGAAATGTCCACGGTTTGGTGCCTTGCAACAGTCGTATTGGTAAAGTGAAAAGAAATGTCACCATGTTGGCATTAGTCCTTACTTTGGGTGCTCTACTTCTGGTAGTACTCGTGGTTGTAGTTTTGTTTTGTATTCGCTACAGAAGAACAATAACAGAAGGCAAAAAGGAGGATGCTAAAGAAGAAGAAACTCAGGAACATTATGCCATATGGAGTTATGATGGAAAATTAGTGTATGAAAATATCATTGAAGCCACAGAGAATTTTGATGACAGATATCTTATTGGAGTAGGAGGGTCTGCATCTGTTTATAGGGCTAAATTACCCACAGGACAGACTGTTGCTGTGAAAAAGATTCATGCTGCACCCGATGAAGAAACACCGGATTTAAAAGCTTTTATGACTGAGGTTAAAGCCTTGGCAGAAATCAAGCATCGTAACATTGTGAAGTCACTTGGATATTGTTTACATCCACGTTTCTCCTTTTTGGTTTATGAGTTCCTAGAGGGTGGTAGTTTGGATAGAGTACTCATGGATGATGTACGTGCAACAACGTTTGATTGGAACATGAGGGTAAAGGTTGTTAAAGGTGTCGCTAATGCTTTGTATCATATGCATCATGGTTGCTTTCCTCCTATCATTCATCGAGACATATCAAGCAAGAATGTTCTTATAGATTCGGAATACGAAGCAAAAATTTCTGACTTTGGAACAGCTAAAATTCTGAATCCTGATTCACGCAATTTAACAGCTTTTGCAGGCACATATGGGTATGCTGCACCAGAGCTTGCTTATACAATGGAAGTGAATGAAAAATGTGATGTGTTCAGTTTTGGAGTGCTTTGCTTTGAAATAATGATGGGAAAGCACCCAGGAGATCTCATTCCATCGTTGTTTCCATCTTCTGAAACAACATCAGCGTATAATTTGCTGTTGAAGGATATGTTGGACCAAAGACTAGCCCTTCCAGAGAATCCAGTTGATGAGGAGGTGATTTTGATTGCCAAAGTAACATTTGCTTGCTTAAGTGAAACTCCACGTTTTCGTCCAAGCATGGAACAAGTGTATAACGATTTTGTGATGCCAAAATCATCTTCGCTCAATTCACTCTCCATCGTCACACTTGCTCAACTTGTCAATAACTGA 2394 0.4002 MVFTVLSVALCSLLGLHFFTIFSSAATIDENQVREAGALLEWKASLDNQSQASLSSWTEGVNHCKWKEIICDKSNSVTTINVANHGLKGTLHTLNFSSFPNLLTLDVSNNSFSDTIPQQIANLSRVSELIMNKNNFSGPIPISMTKLANLKILNLKYNNISGPLPEEIAELRNLESLLFESNHLSGTIPPTIGRMANLVELNLQLNSINVLHTNKLEGRLPPGMNNFTNLISLQLAGNSFTGPLPQQICLGGSLTSLSAEGNNFTGPVPKSLKNCSSLMRLKLEGNRLSGNISDDFGVYPLLNYIDLSGNNFYGDISPNWAKCPSLSSLIMSNNNLTGSIPPELSRAPRLADLNLSSNHLTGRIPKELGKLTSLLKLSDGLAKIDISNNQLEGPIPNSRAFRNVSFDALKGNKGLCGNVHGLVPCNSRIGKVKRNVTMLALVLTLGALLLVVLVVVVLFCIRYRRTITEGKKEDAKEEETQEHYAIWSYDGKLVYENIIEATENFDDRYLIGVGGSASVYRAKLPTGQTVAVKKIHAAPDEETPDLKAFMTEVKALAEIKHRNIVKSLGYCLHPRFSFLVYEFLEGGSLDRVLMDDVRATTFDWNMRVKVVKGVANALYHMHHGCFPPIIHRDISSKNVLIDSEYEAKISDFGTAKILNPDSRNLTAFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCFEIMMGKHPGDLIPSLFPSSETTSAYNLLLKDMLDQRLALPENPVDEEVILIAKVTFACLSETPRFRPSMEQVYNDFVMPKSSSLNSLSIVTLAQLVNN 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01454 797 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Vian7g01454 797 SUPERFAMILY L domain-like 71 416 - -
Vian7g01454 797 Gene3D Phosphorylase Kinase; domain 1 465 583 - -
Vian7g01454 797 ProSitePatterns Tyrosine protein kinases specific active-site signature. 629 641 IPR008266 GO:0004672|GO:0006468
Vian7g01454 797 SUPERFAMILY Protein kinase-like (PK-like) 487 775 IPR011009 -
Vian7g01454 797 Gene3D Transferase(Phosphotransferase) domain 1 584 786 - -
Vian7g01454 797 ProSitePatterns Protein kinases ATP-binding region signature. 511 534 IPR017441 GO:0005524
Vian7g01454 797 FunFam Leucine-rich repeat receptor protein kinase MSP1 468 583 - -
Vian7g01454 797 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 207 429 - -
Vian7g01454 797 ProSiteProfiles Protein kinase domain profile. 505 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01454 797 PANTHER LEUCINE RICH REPEAT KINASE 2 27 209 - -
Vian7g01454 797 FunFam Nuclear pore complex protein NUP107 32 185 - -
Vian7g01454 797 Pfam Leucine rich repeat 301 360 IPR001611 GO:0005515
Vian7g01454 797 Gene3D Ribonuclease Inhibitor 293 425 IPR032675 -
Vian7g01454 797 Gene3D Ribonuclease Inhibitor 187 292 IPR032675 -
Vian7g01454 797 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Vian7g01454 797 FunFam MDIS1-interacting receptor like kinase 2 584 781 - -
Vian7g01454 797 Pfam Protein kinase domain 509 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01454 Vian-Chr7 23162571 23165743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01454 102 677 Receptor kinase-like Gene Family AT4G08850 38.673 1.38e-131 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vian7g01454 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01454 - - vra:106762950 910.212