Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01452 ATGATGTTCACAAAGCTTGTAAAATTTCAGTATATTCTCACCACCTTTTTCTTTTCACTTTTAAGGTTCTATTCCTCGGAAGTTTCTGGTGTATCTTTATCCAATGGTACTGTTATGTTTGGCTATGAAGCTGTCGAAGATGAAAACATTGAAGCAAGTGCTCTATTGAAGTGGAAAGCCAGCCTTGATAACCAAAGCCAGGTTTCCTTGTCTTCTTGGTCTACTTTCACTACCCCTTGCAAGTGGAAGGGAATAGTTTGTGATGAATCCAACTCTGTCAGCACTATAAATCTTGAAAACTTTGGACTACAAGGTACACTTCTCAATCTAAACTTGTCATCCTTTCCTAAGCTTCTGAGGTTGTATGTAAGTTACAACAACCTCAGTGGACCTATTCCTCGTCAAATTGGTAACATGTCCAAAATTTCGGTGTTGAAAATGAAACATAATTATTTTAGTGATTCTATCCCCCTGACAATTGGAATGTTGGCAAATCTTGTTACACTTGATTTATCATGCAACCTTCTCTCTGGTACAATCCCTTCACTTAGAAACTTAACAAATTTAGAACACCTTATCCTCTTCAGCAACCTTCTCTCTGGTCCCATTCCTGAGGATTTGGGAGGACTTCATCATCTCAGAACAATCAAGTTCTATAATCATTTCACTGGTCCTTTGCCACAATATATTTGCCTTGGAGGGTCACTTCAAAATTTTGCAGCCAATGAAAATCGTTTGACTGGTCCAATTCCATCAAGTTTGAAGAACTGCTCTAGTCTTATGAGGCTCAACCTTGCAAAAAATATGTTGATGGGAAATATTCCAAATGATTTTGGTCTGTATCCAAATTTGAAATACATAGATCTGAGTAGAAATGCCTTCAACGGCAACCTTTCATCAAATTGGGTCAAATGTCATAATCTCACAGGCCTAATTATCTCATACAACAGATTATTCGGTGGTATACCCCCAGAGTTAGGCCAGGCACCTAAATTACAAATGCTTGAACTTTCTTCAAATCGTCTAACAGGAAAGATTCCAAAAGAACTTGGGAACTTGACCCAATTGTTTCACCTCTCCATAAGTAAGAACAATCTTTCAGGCAATATTCCCATTGAAATTGGTTCCTTAAAGAACCTTCAGCTCTTTGATCTTGCAACAAATAATTTAAGCGGTCCAATCCCAAAACAGCTCGGCAGGTTGCTCAAGTTAAATCACTTGAACTTAAGCCATAACAATTTCACGGAAAGCATTCCATCTGAATTTAGCCAATTGCAACATCTTCGAGAACTTGATCTTAGTGGGAATTCTTTGAATGGAAAAATTCCAGCAACACTTGGAAAATTGAAGATGTTGGAAAACTTGAACCTCTCCCACAACAATCTCAGTGGAAACATTTCTGCCAGTTTTAAGAATATGTTCAGTTTGACAAATGTTGACATATCTAACAACCAGTTAGAGGGTCCAATTCCTAACAATCGAGCCTTTCTTAATGCTCCATTTCAAGCACTGCAAAACAACAAAAACTTGTGTGGCCATGCTTCTGGGCTGATGCCTTGCCCGCAGGTCTTGAGCCACAGTCCTAATAATATCAAGACCATGATGTTTTTACTATTCCTTGCTTTGGGTGCACTATTTGTGGTTGGAGTTTCACTATATATTCATTCGCAAAAAGCAAGAAAAATGAAAAAGCAAGAGAAAGAAGAACAAAATCGAGATCTTTTTTCTATATTGCATTATGATGGGAAAATAGTGCATGAAACCATCATCGAAGCAACAAATAATTTCGATGAAAAATATCTCATCGGAAAAGGAGGGTTTGGAGGTGTTTACAAGGCCATCTTACCCTCTGGCCAGATTGTTGCTGTGAAGAAACTTCAGGTTGAAGTTGACAGGGAAATGGTTGATTTTAAGGCTTTTACATCTGAAGTTCGAACCTTGACAGAAATCAAACATCGTAACATTGTGAAGTTGCATGGGTTTTGTGAACATCCACGCTATTGTTTCTTGGTTTATGAGTTCGTAGAAGGTGGCAGCTTGGATAAAGTACTAAGCAGCGAAACACATGCAGCAATGTTTGATTGGAATAAGAGGGTTAACGTTGTTAAAGGAGTGGCAAATGCTTTGTATCATATGCACCATGGTTGCTCTCCTCCTATTGTCCATCGTGACATATCAAGCAAGAATGTTCTTATAGATTTGGAATATGAAGCTCGCTTATCTGACTTTGGAACAGCAAAGATTCTGAACCCTAATTCACGTAATTTAACTTCGTTTGCAGGCACTTGTGGATATGCTGCACCAGAGCTTGCTTATACAATGGAAGTGAATGAGAAATGTGACGTGTTCAGTTTTGGGGTGCTTTGTTTGGAAATAATAATGGGAAATCACCCAGGAGATCTGATTTCTTCTATGCATTCACCATCTTCAACATCAGTAACAGCTAATTTGCTATTGAAGGATGTGATGGACCAACGACTACCTCTTCCAGTGATGCCAGTTGTTAAGGAGGTGGTCATCATTGCAAAAGTGGCATTTGCTTGTTTGAATGAAAGACCACTTTCTCGTCCAACCATGGAAGATGTTTATAACAAGTTTGTTATGCCTAAGGAGGAGATGGTGCTACTCAGGGAGGCGATGACGCGACTCAGGGAGGCGTCCTTTCTTTCGCTGGGCCTGGTAGAGTTCCTCCTTTCTCGTGGTGCAGTGAGACGTTTTGGATGTAGGGTTTCATTCCATTTGAAATTGGGTTTCCCACGTTCTTGTGGTTCAATTAAGGTTGATGGGTGCAATACGAGATTCGTCTCTGGAATTGAGGGTTATATTTTGAGAAATTTTGGGTTTTTATGCGTTTTAAGACGAGTAAAACCGAACGATGTTGATCCGATCCTTGCTGGCGTAGCGCTCGGGTGCCGTCGCGACAACGGAGGCGGAGCGAACCTCCGAGGAGAAGAAGCAGAAGTCGTCGAGGGTGCAGGACTCTCCAGCGATGGTGATGACGTAAGCAAACCTTACGGTGACGATGAGAAGGCCGATGATGAGTAA 3045 0.403 MMFTKLVKFQYILTTFFFSLLRFYSSEVSGVSLSNGTVMFGYEAVEDENIEASALLKWKASLDNQSQVSLSSWSTFTTPCKWKGIVCDESNSVSTINLENFGLQGTLLNLNLSSFPKLLRLYVSYNNLSGPIPRQIGNMSKISVLKMKHNYFSDSIPLTIGMLANLVTLDLSCNLLSGTIPSLRNLTNLEHLILFSNLLSGPIPEDLGGLHHLRTIKFYNHFTGPLPQYICLGGSLQNFAANENRLTGPIPSSLKNCSSLMRLNLAKNMLMGNIPNDFGLYPNLKYIDLSRNAFNGNLSSNWVKCHNLTGLIISYNRLFGGIPPELGQAPKLQMLELSSNRLTGKIPKELGNLTQLFHLSISKNNLSGNIPIEIGSLKNLQLFDLATNNLSGPIPKQLGRLLKLNHLNLSHNNFTESIPSEFSQLQHLRELDLSGNSLNGKIPATLGKLKMLENLNLSHNNLSGNISASFKNMFSLTNVDISNNQLEGPIPNNRAFLNAPFQALQNNKNLCGHASGLMPCPQVLSHSPNNIKTMMFLLFLALGALFVVGVSLYIHSQKARKMKKQEKEEQNRDLFSILHYDGKIVHETIIEATNNFDEKYLIGKGGFGGVYKAILPSGQIVAVKKLQVEVDREMVDFKAFTSEVRTLTEIKHRNIVKLHGFCEHPRYCFLVYEFVEGGSLDKVLSSETHAAMFDWNKRVNVVKGVANALYHMHHGCSPPIVHRDISSKNVLIDLEYEARLSDFGTAKILNPNSRNLTSFAGTCGYAAPELAYTMEVNEKCDVFSFGVLCLEIIMGNHPGDLISSMHSPSSTSVTANLLLKDVMDQRLPLPVMPVVKEVVIIAKVAFACLNERPLSRPTMEDVYNKFVMPKEEMVLLREAMTRLREASFLSLGLVEFLLSRGAVRRFGCRVSFHLKLGFPRSCGSIKVDGCNTRFVSGIEGYILRNFGFLCVLRRVKPNDVDPILAGVALGCRRDNGGGANLRGEEAEVVEGAGLSSDGDDVSKPYGDDEKADDE 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01452 1014 SUPERFAMILY L domain-like 271 512 - -
Vian7g01452 1014 SMART LRR_typ_2 186 210 IPR003591 -
Vian7g01452 1014 SMART LRR_typ_2 353 377 IPR003591 -
Vian7g01452 1014 SMART LRR_typ_2 425 448 IPR003591 -
Vian7g01452 1014 SMART LRR_typ_2 115 139 IPR003591 -
Vian7g01452 1014 SMART LRR_typ_2 163 185 IPR003591 -
Vian7g01452 1014 SMART LRR_typ_2 449 472 IPR003591 -
Vian7g01452 1014 SMART LRR_typ_2 401 424 IPR003591 -
Vian7g01452 1014 Pfam Protein kinase domain 598 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01452 1014 FunFam MDIS1-interacting receptor like kinase 2 675 872 - -
Vian7g01452 1014 Pfam Leucine Rich Repeat 452 473 IPR001611 GO:0005515
Vian7g01452 1014 ProSiteProfiles Leucine-rich repeat profile. 403 425 IPR001611 GO:0005515
Vian7g01452 1014 MobiDBLite consensus disorder prediction 990 1014 - -
Vian7g01452 1014 Gene3D Phosphorylase Kinase; domain 1 554 674 - -
Vian7g01452 1014 SUPERFAMILY Protein kinase-like (PK-like) 583 865 IPR011009 -
Vian7g01452 1014 PANTHER LEUCINE RICH REPEAT KINASE 2 51 872 - -
Vian7g01452 1014 Gene3D Ribonuclease Inhibitor 48 207 IPR032675 -
Vian7g01452 1014 Pfam Leucine rich repeat N-terminal domain 51 88 IPR013210 -
Vian7g01452 1014 FunFam Leucine-rich repeat receptor protein kinase MSP1 558 674 - -
Vian7g01452 1014 SUPERFAMILY L domain-like 51 297 - -
Vian7g01452 1014 ProSiteProfiles Protein kinase domain profile. 596 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01452 1014 ProSitePatterns Protein kinases ATP-binding region signature. 602 625 IPR017441 GO:0005524
Vian7g01452 1014 Pfam Leucine rich repeat 379 438 IPR001611 GO:0005515
Vian7g01452 1014 Pfam Leucine rich repeat 307 366 IPR001611 GO:0005515
Vian7g01452 1014 Gene3D Transferase(Phosphotransferase) domain 1 675 880 - -
Vian7g01452 1014 Gene3D Ribonuclease Inhibitor 218 522 IPR032675 -
Vian7g01452 1014 ProSitePatterns Tyrosine protein kinases specific active-site signature. 720 732 IPR008266 GO:0004672|GO:0006468
Vian7g01452 1014 FunFam Nuclear pore complex protein NUP107 48 192 - -
Vian7g01452 1014 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Vian7g01452 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 212 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01452 Vian-Chr7 23140560 23147052 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01452 121 768 Receptor kinase-like Gene Family AT4G08850 45.166 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vian7g01452 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01452 - - gmx:100800924 1046.96