Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01425 ATGTCAGATGACATGCTCATTCATTTCTCGTCCAACTCTTCAAACCAATCCGATCATTCTCTGCCTACAAAGATTGCAAAGTTGGAAGCTCGTATGGTTGGTAAGGGTTCCTCAACCTCTTCTCAGCAACCAGGTTGGTCCTCTGTGTCTGTTCCTTCGGCTGGGAAATTTGTTCGAGCTGTTGAAAATTCGGCTGAAGCATCCACTTCAAGTGATTCTGATGATGATAATGGTGGGGCATTCTTGATACAAGCCAACACATCGAAGCGACAAAAACTTCAAGAAGATGGCAACACTAGTGTTTTTGAAAGCGTTGAGGTTGTTACTGATGGAAGGCAAACTAGTTTGGATGCCGTGGAGACAAAAATGCACATTGAAATGAATAGAAAGAAACATGGTCGTGGAAGAGGGAGTTCTGGTTCGGGTAGAGGCCGGGGTTCCAGAGTTAATGATCAGACCAAAACACTAATTTCTTCTCCAACTGCTTTGACTTCAAATGGTCAGATCGACAATGTATACCATAAAGGTGGCAAACCCAGTGATCAGTTTCATAGTGATAATTGTATTTCATTAGAGGACGAGGTTGCATCTTTGCAAGCTAAAATTGTTGCTTTGGAGGAGGAATTGCGGAAATCAAAGCAAGAAGCAGTCGATTATCAGAATCTTACTCAGCAACTAGAAAAGGAAATGAAGGAGATGACTGATCATGAACAACAAATGAAGCCTAAGAGGATGAAAGTAATATCTGACTTGCTGATATCCGTTTCAAAAGCCGAAAGACAAGAAGCAAGACTAAAAGTACGACAAGACTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCATATCTGAAACCTGGGAAGATGGTCAAGCTTTAAAGGATCTGAATGCCCAGCTTAAACAACTAGTAGAAACCAAGGAGGCAATAGAACGACAGCGCAAATTGTTTAAGAAAAAGCAATCTGATAAGGGTGATGGGACAGATGCAGAGGTTGGATTGCCAGAAGATATTCTAATTCACGATGAAATTTACAAGTGTCGATTAGCTAGTCTTAAAAGAGAAGAGGAGATTGTTTTACGAGAGAGGGATCGGTATGAAATAGAGAAGGGGAGGTTAATTCGTGAGATGAAACGCATACGGGATGAAGATGGTTCACGGTTTAACAACTTTCAGATTCTAAATCATCGTTATGCTCTTCTTAACCTTCTTGGGAAGGGAGGATTCAGTGAGGTGTACAAGGCTTTCGATTTGGTGGACCATAGATATGTTGCTTGCAAACTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAGAGCTACATACGACATGCAATTCGGGAGTATAATATTCACAAGACTCTTGTACATCGTCACATTGTTCGTTTATGGGACATCTTTGAGATTGATCAGAACACGTTCTGCACTGTTCTAGAGTATTGTAGTGGGAAAGATCTTGATGCTGTTCTTAAAGCAACGCCTATATTATCTGAGAGGGAGGCTAAGGTCATCATAGTTCAGATTTTTCAAGGTCTTATTTATATGAATAAAAGAACACAGAAAATTATCCATTATGATTTGAAGCCTGGAAATGTTCTGTTTGATGAACTTGGTGTTGCCAAAGTGACTGATTTTGGTCTTAGTAAGATAGTGGAGGATGATGTTGGATCCCAAGGTATGGAACTTACGTCCCAGGGAGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCTGGTATTTTGTATTATCAAATGCTCTTTGGCCGACGACCTTTCGGGCATCACCAAACCCAAGAGAGAATACTTCGTGAGGACACAATTATTAAGGCTCGGAAGGTTGACTTTCCTTCTAAACCTACCATTTCTAACGAGGCAAAGGATTTTATCCGAAGGTGTCTAACATATAACCAGGCTGAGAGACCAGATGTGTTAACCATTGCTCAAGACCCATATCTCACTTTCTCAAAGAAGTAA 2040 0.4088 MSDDMLIHFSSNSSNQSDHSLPTKIAKLEARMVGKGSSTSSQQPGWSSVSVPSAGKFVRAVENSAEASTSSDSDDDNGGAFLIQANTSKRQKLQEDGNTSVFESVEVVTDGRQTSLDAVETKMHIEMNRKKHGRGRGSSGSGRGRGSRVNDQTKTLISSPTALTSNGQIDNVYHKGGKPSDQFHSDNCISLEDEVASLQAKIVALEEELRKSKQEAVDYQNLTQQLEKEMKEMTDHEQQMKPKRMKVISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLKQLVETKEAIERQRKLFKKKQSDKGDGTDAEVGLPEDILIHDEIYKCRLASLKREEEIVLRERDRYEIEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVDHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILSEREAKVIIVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILYYQMLFGRRPFGHHQTQERILREDTIIKARKVDFPSKPTISNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTFSKK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01425 679 Coils Coil 188 239 - -
Vian7g01425 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Vian7g01425 679 Pfam Protein kinase domain 402 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01425 679 ProSitePatterns Protein kinases ATP-binding region signature. 407 430 IPR017441 GO:0005524
Vian7g01425 679 MobiDBLite consensus disorder prediction 143 169 - -
Vian7g01425 679 CDD STKc_TLK 400 673 - -
Vian7g01425 679 SMART serkin_6 401 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01425 679 MobiDBLite consensus disorder prediction 63 80 - -
Vian7g01425 679 Coils Coil 352 386 - -
Vian7g01425 679 MobiDBLite consensus disorder prediction 126 169 - -
Vian7g01425 679 MobiDBLite consensus disorder prediction 61 80 - -
Vian7g01425 679 MobiDBLite consensus disorder prediction 1 22 - -
Vian7g01425 679 Gene3D Transferase(Phosphotransferase) domain 1 392 679 - -
Vian7g01425 679 ProSiteProfiles Protein kinase domain profile. 401 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01425 679 SUPERFAMILY Protein kinase-like (PK-like) 393 675 IPR011009 -
Vian7g01425 679 PANTHER MIXED LINEAGE PROTEIN KINASE 10 676 - -
Vian7g01425 679 FunFam Serine/threonine-protein kinase TOUSLED 392 679 - -
Vian7g01425 679 Coils Coil 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01425 Vian-Chr7 22761999 22770171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01425 384 679 MAP Kinase Kinase Kinase AT3G13530 27.667 6.45e-28 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Vian7g01425 Pkinase 2.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01425 K08864 - gmx:100805168 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01425 7 22761999 22770171 Vian7g01425 7 22761999 22770171 ECH