Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01409 ATGATAAACATGGGAGAAGGAAGTGACCATCAAGCTATGGCGGATGATGGGAATGTTGAACATATTGGAGGTGGAGTTAATAAGGCTGAAAACAACTCTGGCTCTCATGTTGAGGTTGGGGTTTCTGAGCCATATGTGGGTAGGGAGTTTGATTCTGAAGATGCTGCAAAGACTTTCTACAATGAGTATGCCAGACGAGTGGGTTTCAGCTGCAAAGCTGGTGCAAAGGGTCGTTCCAAAGCCATTGGGGAGAATATGTACTGCGAATTTGTCTGTGGCAGGGAGGATTTGAAAAGAAAGCTTGCTGGCAGTTGCAATGCAATGATTAGGATCGAGAAGAAGGGCCAAAATAATTGGGTTGTTACACAATTTGTAAAGGAGCATAGCCATTCCATGGCAAACCTTAGTAAGGTGCAGAGTATTAGGCCTCGCAAGCACTTTTCTAGTGTGGGAAGAACCATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGCGGTGTGATGTATGTATCTATGGATAAGAATGGCATTCCTACTAAGAATATTCACGGGATTAGGAATATTCCTGCTGTTGCTACTATTGCTGAAACAGTTCACCCGGTTAAAAGTCCTTCAATGATGAATTATGCTGTTAGACCACCTATTCAAAGGAGGACATTAGGGAGGGATGCTCACAACCTGCTGGAGTACTTTAAGAAAATGCAAGCTGAGAACCCTGGTTTCTTCTATGCAATACAACTTGATGATGATAATCACATGTCTAATGTGTTTTGGGCAGATGCGAGATCAAGGACTGCTTATGGTCATTTTGGTGATACGGTTACTATGGACACAACTTACAGAATAAATCAATATAGAGTGCCCTTTGCTCTGTTCACCGGGGTAAACCATCATGGTCAGATGATTTTGTTTGGTTGTGCACTCCTCTTGGATGATTCTGAGGCTTCTTTTATCTGGCTCTTCAAGACATTTTTGACAGCAATGAATGATCGTTACCCTGTCTCTATCACTACTGATCAAGACAGAGCTATACAAACAGCAATTTCACAAGTTTTTCCTCAAACACGGCACTGTATAAGCAAATGGCATGTCTTGCGAGAAGGCCATGAGAAGTTGGCCTATGTATGCAACATGCATCCAAATTTTCAGATTGAACTATATAATTGTATTAATCTGACAGAAACAGTTGAGGAGTTTGATTCATCGTGGAATTTTATCATGAATAAATACGATCTCACAAAAAATGATTGGCTTCAGTCATTGTACAATGCTCGTGCACAATGGGTTCCAGCATATTTCCGTGATTCATTTTTTGCAGTAATATCTCCTAATCACGGAATTGAAGGTTCTTTTTTTTATGGTTTTGCCAACCATCAGGCGACATTGCCAGTGTTCTTTAGGCAGTACGAACAAGCTTTAGAGAGCTGGTTTGAAAAAGAATTAGAAACAGATTATGAGACAATTTGCACCACCCCTGTCCCGAGGACACCTTCCCCAATGGAGAAGCAGGCTGCTAATCTCTATACTCGGAGAATATTTTCAAAGTTTCAAGAAGAGCTAGTGGAAACCTTTGCTTATACAGCCAACAGAATTGAAGAAGATGGAGAAAGTAGCATATTCAGGGTTGCAAAATTTGACGATGACCAAAAGGCTTATGTTGTCACATTAAACCTTTCTGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTATGTAGACATGTTCTAACTGTTTTTACTGTGACTAATGTACTTACATTGCCATCTCATTATATTTTAAAACGGTGGACAAGAAATGCAAAAGTCAGTGCTGGGTCAGTTGAACATGCCGGTGAACTGCATGTACATGAGTCTTTGGCATCACGATATAGCAATCTTTGTTGGGAAGCCATCAAATATGCTGAAGAAGGGGCAATGACTGTGGAAACACATGATACTGCAATTGGTGCTCTTCGAGAAAGTGCAAAGAAGATTTCTTTCATGAAGAGAAGTGTTGCCAAAGTTTCCCCACCCAGTCATCCCGTCAGCGGGGCTGCTTATGATGACAGAAAATCCCCTACTTCAACAGCAGATACAAACCCTCTTCTGTGGCCACAGCAGGATGAAATAACGAAGAGGTTTAATCTTAATGATGCTAGTACTCCTGTTCAATCAGTTGCTGATCTAAATTTACCACGAATGACCCCAGTGTCTCTTCAGCGAGATGATGGTACACCTGAAAACATGGTGGTTTATCCCTGTCTGAAATCATTGACATGGGTAATGGAGAACAAGACCTCAACACCAGGGAATAGAGTGGCTGTTATCAATCTTAAGTTGCAAGATTATAGCAGGAATCCATCAACAGAATCGGAAGTTAAGTTTAATCTCTCAAAAGTTACTTTGGAACCGTTGTTTAACCATATGGTCAACATCAGAGACCAACTTTCTGCACCAACTAGGAAGTTTGCTGTATTAAATTTAAAGCTTCCAGTTGCCGATACAAATACTGGTGTGTGTGAAGTCAAGTTTCAGGTGTCCAGGGATACATTAGTTGCTGTACTACGATCAATGGACTATATACGTGAGCAACTATCGGTTCCTGGCGATGCACAAACAGAAGCTGCTATATTGAAAAGACCTCGGAAGTGA 2649 0.4126 MINMGEGSDHQAMADDGNVEHIGGGVNKAENNSGSHVEVGVSEPYVGREFDSEDAAKTFYNEYARRVGFSCKAGAKGRSKAIGENMYCEFVCGREDLKRKLAGSCNAMIRIEKKGQNNWVVTQFVKEHSHSMANLSKVQSIRPRKHFSSVGRTMPETYQGVGLVPSGVMYVSMDKNGIPTKNIHGIRNIPAVATIAETVHPVKSPSMMNYAVRPPIQRRTLGRDAHNLLEYFKKMQAENPGFFYAIQLDDDNHMSNVFWADARSRTAYGHFGDTVTMDTTYRINQYRVPFALFTGVNHHGQMILFGCALLLDDSEASFIWLFKTFLTAMNDRYPVSITTDQDRAIQTAISQVFPQTRHCISKWHVLREGHEKLAYVCNMHPNFQIELYNCINLTETVEEFDSSWNFIMNKYDLTKNDWLQSLYNARAQWVPAYFRDSFFAVISPNHGIEGSFFYGFANHQATLPVFFRQYEQALESWFEKELETDYETICTTPVPRTPSPMEKQAANLYTRRIFSKFQEELVETFAYTANRIEEDGESSIFRVAKFDDDQKAYVVTLNLSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKVSAGSVEHAGELHVHESLASRYSNLCWEAIKYAEEGAMTVETHDTAIGALRESAKKISFMKRSVAKVSPPSHPVSGAAYDDRKSPTSTADTNPLLWPQQDEITKRFNLNDASTPVQSVADLNLPRMTPVSLQRDDGTPENMVVYPCLKSLTWVMENKTSTPGNRVAVINLKLQDYSRNPSTESEVKFNLSKVTLEPLFNHMVNIRDQLSAPTRKFAVLNLKLPVADTNTGVCEVKFQVSRDTLVAVLRSMDYIREQLSVPGDAQTEAAILKRPRK 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01409 882 SMART 26again6 564 591 IPR006564 GO:0008270
Vian7g01409 882 MobiDBLite consensus disorder prediction 675 701 - -
Vian7g01409 882 Pfam MULE transposase domain 275 366 IPR018289 -
Vian7g01409 882 Pfam SWIM zinc finger 553 587 IPR007527 GO:0008270
Vian7g01409 882 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 665 IPR031052 GO:0006355
Vian7g01409 882 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Vian7g01409 882 Pfam FAR1 DNA-binding domain 58 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01409 Vian-Chr7 22561535 22575764 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vian7g01409 MULE 1.5e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01409 - - gmx:100807296 1538.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01409 7 22561535 22575764 Vian7g01409 7 22561535 22575764 ECH