Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01404 ATGGCAGGTAATCTACCAACAGCAACTGAAGGACGCCCCTTGAAATGTAAAGCTGCGATTTGCCGCAAGCCTGGCTCTCCACTGACTATTGAGGAGATCATTGTAGCACCTCCATTGCCTCGTGAAGCAAGGATTCGTGTTATATGCACTTCTCTCTGTCATACCGATGTTACATTTTGGAATATGCAGGACCCTTCTCCAAGAATCTTGGGTCATGAGGCTGTTGGGGTTGTGGAAAGTGTTGGAGAGGGTGTAACTGAACTTGCAAAAGGAGATTTGGTTGTCCCAATTTTCTTAGCTGATTGTGGGGAGTGTTTAGATTGCAAATCAAGCAGGAGCAATCTTTGTTCAAATTTTCCTTTTCAGTTCTCTCCTTGGATGCCTAGAGATGGCACATCAAGATTCAAGGATTCAAAAGGAGAGATCATACAGCATTTCATGTTTGTTTCTAGTTTTAGTGAGTACACTGTGATTGACACTGCCCATCTAACCAAAGTTGACCTACCAATACCACCCAAGCTGGCATGCCTACTTGGCTGTGGAATATCAACTGGAGTAGGTGCTGCTTGGAAATCTGCGGGTGTGGAGCCAGGCTCTACAGTAGCAATTTTTGGGCTGGGAAGTATTGGATTAGCTGTTGCTGAGGGAGCTAGAATTTGTGGAGCAACTAAGATTATAGGTGTGGATATCAACCCAGAGAAATATGAAGTTGGAAAAAAGTTTGGAGTCACTGACTTTGTCCATTCTGGAGAAAGCAAAGACAAAACTGTGAGCCAGATAATCATGGAGATGACTGATGGGGGAGCAGACTATTGTTTCGAATGTGTTGGCAAGGCGTCACTGATGGAAGATGCATACGCTTCTAGTAGAAGGGCTTGGGGAAAAACGGTAGTTGTCGGATTGGACAAGCCAGGATCCAAGTTGAGCCTTGACTGTGGTGAAGTACTGCTCAGTGAGAAGACACTCAGGGGATGCTTATTTGGAGGACTCAAACCTAAGACTGATGTACCTACTCTCATGAAACGCTACTTGGATAAGGAACTGAATCTGGATGAGTTTGTCACACATGAGGTGCAGTTTCAGGATATCAACAAAGCTTTTGATTTGTTGATTGAAGGAAAGAGTCTCCGATGTGTGATCTGGATGGACAAGTGA 1155 0.445 MAGNLPTATEGRPLKCKAAICRKPGSPLTIEEIIVAPPLPREARIRVICTSLCHTDVTFWNMQDPSPRILGHEAVGVVESVGEGVTELAKGDLVVPIFLADCGECLDCKSSRSNLCSNFPFQFSPWMPRDGTSRFKDSKGEIIQHFMFVSSFSEYTVIDTAHLTKVDLPIPPKLACLLGCGISTGVGAAWKSAGVEPGSTVAIFGLGSIGLAVAEGARICGATKIIGVDINPEKYEVGKKFGVTDFVHSGESKDKTVSQIIMEMTDGGADYCFECVGKASLMEDAYASSRRAWGKTVVVGLDKPGSKLSLDCGEVLLSEKTLRGCLFGGLKPKTDVPTLMKRYLDKELNLDEFVTHEVQFQDINKAFDLLIEGKSLRCVIWMDK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01404 384 FunFam Alcohol dehydrogenase 6 19 196 - -
Vian7g01404 384 Gene3D - 19 377 - -
Vian7g01404 384 SUPERFAMILY GroES-like 333 381 IPR011032 -
Vian7g01404 384 Pfam Zinc-binding dehydrogenase 209 341 IPR013149 -
Vian7g01404 384 PANTHER ALCOHOL DEHYDROGENASE 12 380 - -
Vian7g01404 384 SUPERFAMILY GroES-like 9 191 IPR011032 -
Vian7g01404 384 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Vian7g01404 384 Gene3D - 185 325 - -
Vian7g01404 384 Pfam Alcohol dehydrogenase GroES-like domain 41 165 IPR013154 -
Vian7g01404 384 FunFam S-(hydroxymethyl)glutathione dehydrogenase 185 325 - -
Vian7g01404 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 345 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01404 Vian-Chr7 22533716 22536810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01404 48 370 Monolignol Biosynthesis Gene Families AT2G21730 24.412 2.52e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01404 K00121 - gmx:100806887 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01404 7 22533716 22536810 Vian7g01404 7 22533716 22536810 ECH