Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01399 ATGCAGGCTATCTGGTTGATGCTATTGTTGTTGGTGGCCATTGCATTGGGGAATTCAGACATTGATGCTCTCCTTGAATTTAAGAAAAGCATTCAGAATGACCCTTCTGGATTAGTTTTTAATTCTTGGAATTCCAAGTCTTTAGATTCTGATGGATGTCCTAGGAACTGGTATGGAATATGGTGCAGTGAAGGCAGTGTTATATCAATCACTCTGGACAATGCTGGTTTGGTTGGTGACTTTAATTTCCATGCAATTCTTGGCCTTGCAATGCTTCGCAATTTGTCAGCCGTGAACAACCAGTTCACTGGAGAACTCTCACATGCTTCTGCAATGGAATCACTTGAATATCTTGATTTGTCCCTCAACAAGTTTAATGGATCGTTACTCTCTAACTTGGTTCAGTTGCGCAAGTTAGTATATCTGAATCTTTCTTCTAATGAACTTGGAGGCCCTCTTAGTATAGAGTTTCACAAACTTGGGAAGTTGAAGTATTTAGATTTGCACATGAATAACTTTTCTGGGGACATAATGCATACCTTTTATCAGATGGGAAGTGTGCTATATGTTGACTTGAGCAGCAACAGGTTCTCTGGTGCACTGGATTTGGGACTTGTAGATGAATCTTTTCTCTCCTCAATTCAATATTTAAATGTTAGCCATAATTCCTTGAGTGGTGAGTTATTTGTTCATGATGGTATGCCATATCTTGACAATTTAGAGGTGTTCGATGCTAGTAATAATCTGTTAGAGGGTAATATACCTTCCTTTACTTTTGTGGTATCTCTTCGGATACTTCGACTTGCATTCAACCAGCTCACTGGTTTGCTGCCAGAAGCTCTATTGAAGGAAAGTTCAATGATGTTGTCAGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCCATTGGAATTATTACCTCGGTGACTCTGAGGAAGCTTAATTTATCTTCAAACAAGTTGTCTGGCCCCTTACCTCTGAGGGTAGGCCACTGTGCTGTCATAGATTTTAGTAATAACACGCTATCAGGTAATTTCTCAAGGATTGGATATTGGGGTAACTATGTGGAAGTTGTTCAGTTAAGTACAAACACATTGATTGGAATGCTTGCAAATGAAACTTCTCAATTTTTAAGGTTAACTGAACTTAAGGCATCCAATAACTTGTTAGAGGGCTTTCTCCCACCGAATTTGGGAACATATCCAGAACTGAAGGAGATTGATCTTAGCCTCAACCAGCTTTCTGGGTTCCTCCTACCAATCTTTTTTTACTCAACCAAATTGATTAATCTAAATCTCTCCAACAATAAGTTTTCTGGATCAATTCCTATTCAATTTCAACCTCCAAATACTCCATTGGTTTCTACTGAAAATATTAGTCTGGTGTTTCTTGATCTTTCAAACAACAACTTGAGTGGGCCTCTTCCTTCAAATATGAGTAGGCTTCACAATTTGGCATATCTCAATTTATGCAACAACAAACTGGAAGGTGCTATTCCTGATGACCTTCCAGATGAGTTGAGAGGATTAAATGTGTCCTTCAATAATTTTTCCGGTGTGGTACCTGAAAACTTAAAGCATTTTCCTGAATCAGCATTTCATCCAGGAAATACCATGCTGGTGTTTCCTCATTCGCAATCATCTCCAAAAGATGCTTCCAACCTAGGTTTGAGGGAAGATCGGGTGCATAGAAGGTCTGCCACTAGGATAGCCCTTATTGCATGTTTGGTTGCTGGTGCTTTTGTGATGGCTTTTGTGGGCATAATAATTTACTATAAGGTTCATCATGAAAAAGAAAGGGCTTCTAAACAAAATGAAGCTAGAGGTATCACTCAAGAGGGTACTTTCACATCAAATACAGAGACAGTTTACAGAAATTTGGAAGCATTGCCACCTTCTCAAAGGGGCTCTTCTGATGCAGCAAGAAACATTCATCCAGTGGGAGAGAAGAACGAGGAAGAAATGTATTCCCCAATGTCTATTTTGTCACCTTCAAATCCTTCATCTTCTAAAAGCTACCAGTTTGAGAATCCTGATTCCCTCCAAGTATCATCTCCAGATAAACTGGTTGGAGACTTGCACATATTTGATGGGTCCTTGGTACTAACTGCCGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGTCATGGAACACTTTACAAAGCAACACTAGACTCTGGTCACACATTGGCTGTCAAATGGTTAAGAGAAGGAATAACCAAAGGAAAAAAGGAGTTGGCAAGGGAAATAAAGAAACTTGGGACCATCAAACATCCAAACCTGGTTTCTGTTCAGGGTTACTATCTGGGGCCAAAGGAACATGAGAAACTGATCATATCAAATTACATGAATGCACAATCTTTGGACATTTATCTCCGTGAAGTAGATAAAGCAAATCTGCATCCTTTGACTCTTGATGAAAGGGTGAGGGTGGCTATAGAAGTGGCACTGTGTCTACATTTCTTACATGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTTTGCTAGAAACTCCCAACAAAAATGTTCTCCTCACAGACTACAGCCTGCACAGGATACTCACTGCTGCGGGTACTACCGAGCAAGTTCTGAATGCCGGCGCACTTGGTTACCGGCCGCCGGAGTTTGCTAGATCGAGCAAACCATGCCCTTCCTTGACAAGTGATGTGTATGCATTTGGAGTGGTGTTGTTAGAGCTGATAACAGGAAGAAATTCAGGAGAAATAGTTTCTGGGATTCCAGGGGTAGTTGACCTCACTGATTGGGTGAGGTTTTTGGCTGAACAAGAACGTTGGAGCCAATGCTTTGATAGGTTTCTTCTAGTGGAGAAACATAATGGGGAAAAACCCTCAAAAGTACTTGATGAAATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGATAGGCCTAACATGAAAACCGTCTCTGATGATCTCTCAACAATAATAAGGTAG 2985 0.4054 MQAIWLMLLLLVAIALGNSDIDALLEFKKSIQNDPSGLVFNSWNSKSLDSDGCPRNWYGIWCSEGSVISITLDNAGLVGDFNFHAILGLAMLRNLSAVNNQFTGELSHASAMESLEYLDLSLNKFNGSLLSNLVQLRKLVYLNLSSNELGGPLSIEFHKLGKLKYLDLHMNNFSGDIMHTFYQMGSVLYVDLSSNRFSGALDLGLVDESFLSSIQYLNVSHNSLSGELFVHDGMPYLDNLEVFDASNNLLEGNIPSFTFVVSLRILRLAFNQLTGLLPEALLKESSMMLSELDLSQNKLEGPIGIITSVTLRKLNLSSNKLSGPLPLRVGHCAVIDFSNNTLSGNFSRIGYWGNYVEVVQLSTNTLIGMLANETSQFLRLTELKASNNLLEGFLPPNLGTYPELKEIDLSLNQLSGFLLPIFFYSTKLINLNLSNNKFSGSIPIQFQPPNTPLVSTENISLVFLDLSNNNLSGPLPSNMSRLHNLAYLNLCNNKLEGAIPDDLPDELRGLNVSFNNFSGVVPENLKHFPESAFHPGNTMLVFPHSQSSPKDASNLGLREDRVHRRSATRIALIACLVAGAFVMAFVGIIIYYKVHHEKERASKQNEARGITQEGTFTSNTETVYRNLEALPPSQRGSSDAARNIHPVGEKNEEEMYSPMSILSPSNPSSSKSYQFENPDSLQVSSPDKLVGDLHIFDGSLVLTAEELSCAPAEVIGRSCHGTLYKATLDSGHTLAVKWLREGITKGKKELAREIKKLGTIKHPNLVSVQGYYLGPKEHEKLIISNYMNAQSLDIYLREVDKANLHPLTLDERVRVAIEVALCLHFLHDEKAIPHGNLKSTNILLETPNKNVLLTDYSLHRILTAAGTTEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVVLLELITGRNSGEIVSGIPGVVDLTDWVRFLAEQERWSQCFDRFLLVEKHNGEKPSKVLDEMLKVALRCILPASDRPNMKTVSDDLSTIIR 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01399 994 Gene3D Transferase(Phosphotransferase) domain 1 788 994 - -
Vian7g01399 994 Pfam Leucine rich repeat N-terminal domain 18 63 IPR013210 -
Vian7g01399 994 SUPERFAMILY Protein kinase-like (PK-like) 712 989 IPR011009 -
Vian7g01399 994 Gene3D Ribonuclease Inhibitor 184 354 IPR032675 -
Vian7g01399 994 MobiDBLite consensus disorder prediction 658 680 - -
Vian7g01399 994 FunFam Leucine-rich repeat receptor-like protein kinase 694 786 - -
Vian7g01399 994 Pfam Protein tyrosine and serine/threonine kinase 713 988 IPR001245 GO:0004672|GO:0006468
Vian7g01399 994 SUPERFAMILY RNI-like 237 522 - -
Vian7g01399 994 SUPERFAMILY L domain-like 32 333 - -
Vian7g01399 994 Gene3D Phosphorylase Kinase; domain 1 715 787 - -
Vian7g01399 994 PANTHER OS07G0626500 PROTEIN 5 100 - -
Vian7g01399 994 Gene3D Ribonuclease Inhibitor 454 548 IPR032675 -
Vian7g01399 994 Gene3D Ribonuclease Inhibitor 17 183 IPR032675 -
Vian7g01399 994 Gene3D Ribonuclease Inhibitor 355 453 IPR032675 -
Vian7g01399 994 MobiDBLite consensus disorder prediction 649 680 - -
Vian7g01399 994 ProSiteProfiles Protein kinase domain profile. 709 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01399 Vian-Chr7 22479720 22483182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01399 18 992 Receptor kinase-like Gene Family AT3G28040 29.981 2.16e-77 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vian7g01399 PK_Tyr_Ser-Thr 7.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01399 - - gmx:100781394 1666.36