Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01360 ATGAGAGTAACGGCTAGAAGATTAGTAGCCGTTGATGTGAGAGAAAATCCAACGCAAACAAGAGAGGTTGCTACTGAGACAGTGCTTGAATCCGCGGTGGCGACAACCGACGAAGGAGCCGAAGGAGAGGTGCGGAACGGTGGTCTTCAGGGCTTTCTGTCGTCGCTGTTCTCCACTCTCGGCGGTGTTTTTAGTTCAACTTTTCAAGAAACGCAGCAAAACAACGTTGTTATGGCTTCCATAGCGGAACAACCCGACAAAGGTGAGATTCGTGAGAACAAGCAGAAGAATATGGGTGGTGAAGGAAGAAACAGAAGGGTTCTTCAGGATATTGGGAATCTTGTGGCCAAACAAGGCCATGTTGGTATTAATGTGTCTAAACCTGTGGCAAGGAACTTTCGTGCCCAGTTGTTGGCCAATGCACAAGACAAGAACAAGAAGTCAAGCACTGAAGTGGAGAATGCTGCGGTGGTAGCAAAGGTGAAGGCAGCTCAGAAGCCTAAAGAAGAACCTGAAGTGATAGTGATTAGCTCTGATGATGAAACGGAGGAAAAGGAGAAGCAATATGTTCCTAAAACAAACAAGGCAAGGGACAAAAATGCCAAGGCCTTTAGTTCAGTACTCTCTGCTCGAAGCAAGGCTGCTTGTGGACTCCCCAGGGAACCGGTCTTGAACATTGATGCAACTGATACGGACAATGAATTGGCAGCAGCGGAGTATATTGATGATATATATGAATTTTACAAAAATACTGAGCAGAAAGATGGCTGTGTGCATGATTACATGGGTTCGCAGCCAGATATTAATGCCAAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGTCCATAGAAAATTTGAGCTCATGCCAGAAACTCTCTACTTGACCCTCAACATTGTTGATCGGTTCCTGTCCATGAAGGCCGTGCCTAGAAGGGAACTTCAGCTTGTTGGCATCAGCTCCATGCTGCTAGCCTCAAAATATGAAGAGATATGGGCACCAGAGGTTAATGACTTTGTGTGCATATCAGACAATGCTTATGTCAGTGAACAAGTGCTGTTGATGGAGAAAACAATCCTTAGGAAGCTTGAGTGGTACTTAACGGTTCCCACACCGTATGTCTTCTTGGTTCGGTATATCAAAGCCTCAACTCCATCTGATAAAGAGACGGAATATATGGTGTTTTTCCTTGCTGAACTTGCTATGATGCACTATCCTACCGTAGTCTTGCACTGCCCTTCTTTGATTGCTGCTTCTGCTGTGCTTGTGGCTCGAAGTACTCTTCAAAAGACTCCTTTCTGGACAAGCACTTTGAAGCATTACACAGGCTACTCTGAGGAGCAACTGAGGGATTGCGCCAAAATCCTGGTCAACCTTCATGCCACTGCTCCAGAAAGTAAGCTCAGGGCAGTTTACAAGAAATACAGTAGCTCAGATTGCTCCTCTGTTGCTCTTCGTCCTCCAGCAAAGAACTTGACCGAACTGTCTTAA 1494 0.4565 MRVTARRLVAVDVRENPTQTREVATETVLESAVATTDEGAEGEVRNGGLQGFLSSLFSTLGGVFSSTFQETQQNNVVMASIAEQPDKGEIRENKQKNMGGEGRNRRVLQDIGNLVAKQGHVGINVSKPVARNFRAQLLANAQDKNKKSSTEVENAAVVAKVKAAQKPKEEPEVIVISSDDETEEKEKQYVPKTNKARDKNAKAFSSVLSARSKAACGLPREPVLNIDATDTDNELAAAEYIDDIYEFYKNTEQKDGCVHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSMKAVPRRELQLVGISSMLLASKYEEIWAPEVNDFVCISDNAYVSEQVLLMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDKETEYMVFFLAELAMMHYPTVVLHCPSLIAASAVLVARSTLQKTPFWTSTLKHYTGYSEEQLRDCAKILVNLHATAPESKLRAVYKKYSSSDCSSVALRPPAKNLTELS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01360 497 Gene3D - 243 485 - -
Vian7g01360 497 SUPERFAMILY Cyclin-like 370 492 IPR036915 -
Vian7g01360 497 Pfam Cyclin, N-terminal domain 243 368 IPR006671 -
Vian7g01360 497 PANTHER CYCLINS 188 478 IPR039361 -
Vian7g01360 497 SMART Cyclin_C_2 371 490 IPR004367 -
Vian7g01360 497 Pfam Cyclin, C-terminal domain 371 487 IPR004367 -
Vian7g01360 497 FunFam G2/mitotic-specific cyclin-1 359 485 - -
Vian7g01360 497 SMART cyclin_7 278 362 IPR013763 -
Vian7g01360 497 SMART cyclin_7 375 459 IPR013763 -
Vian7g01360 497 SUPERFAMILY Cyclin-like 232 368 IPR036915 -
Vian7g01360 497 Gene3D - 257 369 - -
Vian7g01360 497 PIRSF Cyclin_A_B_D_E 65 497 IPR046965 GO:0016538|GO:0044772
Vian7g01360 497 CDD CYCLIN_AtCycB-like_rpt1 221 366 - -
Vian7g01360 497 ProSitePatterns Cyclins signature. 273 304 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01360 Vian-Chr7 21948380 21950930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01360 87 494 Core Cell Cycle Gene Families AT2G26760 53.528 1.69e-146 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01360 K21777 - gmx:547782 640.573