Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01348 ATGTCAATTTTGAGAGGAATTTGTGTGCTGAGAGTGGGAGTGGCAACTCCAAAACCTTACCTTCTTCCCTCTATCTTTTCATCATCCTTCAACATTCGTACCCTCTCACACACCACTTTTTCCAGAACCTTTCGTTTCCTCCCACCTTCAATTCCTCTTTCATCCTTTGTGCCTCTCATACCTCCCAAAGCAGCAGCCTCTTATGGCACTGGGAGTGGTGGTGCTGAAGATGGTAGGCCAAGGGAACTATTGGTGCAGCATTTGTTGGTCAAAGAAGATGACCAGAAGCTTCTGTTGGATCTTCTGCAAAAAATCTCTTCAGGTGAAGATTTGAGTGATCTTGCTGTGGAACATTCAGTTTGCCCATCCAAAGAAGAAGGAGGAATGCTTGGATGGGTCAAAAAGGGTCAAATGGTTCCTGAATTTGAGGAGGCTGCGTTCAGTGCACCTTTAAACAAAGTTGTAAAGTGCAAAACCAAATTCGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCAATTCTTCAAGACATTCAACCTCATGAGCTGCATGGGAAAATTCAAGATCCCAATTTTTTGGAGGAGGCACAGCTAATTGACGTTCGAGAGCCTGAAGAAGTGGCTAAAGCATCTTTGCCAGGATTTACTGTTCTTCCCCTCCGACAATTTGGAAGCTGGGGGCCTGAAATAACTAAAAAACTTGACCCTGAAAAGGATATATACGTTATGTGTCATCATGGCATGCGGTCATTACAGGTTGCCAAATGGTTGCTGTCACAGGGCTTCAGGAAAGTATACAATGTTTCTGGGGGAATCCATGCCTATGCTGTTCAGGTTGATCCATCAGTACCCACATACTGA 867 0.4452 MSILRGICVLRVGVATPKPYLLPSIFSSSFNIRTLSHTTFSRTFRFLPPSIPLSSFVPLIPPKAAASYGTGSGGAEDGRPRELLVQHLLVKEDDQKLLLDLLQKISSGEDLSDLAVEHSVCPSKEEGGMLGWVKKGQMVPEFEEAAFSAPLNKVVKCKTKFGWHLLQVLSEREESILQDIQPHELHGKIQDPNFLEEAQLIDVREPEEVAKASLPGFTVLPLRQFGSWGPEITKKLDPEKDIYVMCHHGMRSLQVAKWLLSQGFRKVYNVSGGIHAYAVQVDPSVPTY 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01348 288 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 176 286 IPR036873 -
Vian7g01348 288 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 80 170 IPR000297 GO:0003755
Vian7g01348 288 SMART rhod_4 180 283 IPR001763 -
Vian7g01348 288 SUPERFAMILY FKBP-like 79 169 - -
Vian7g01348 288 Pfam Rhodanese-like domain 184 278 IPR001763 -
Vian7g01348 288 Gene3D - 174 285 IPR036873 -
Vian7g01348 288 Gene3D - 80 173 IPR046357 GO:0003755
Vian7g01348 288 ProSiteProfiles Rhodanese domain profile. 194 286 IPR001763 -
Vian7g01348 288 CDD RHOD_2 179 282 - -
Vian7g01348 288 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 34 288 - -
Vian7g01348 288 Pfam PPIC-type PPIASE domain 91 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01348 81 288 Sulfurtransferasese or Rhodanese AT5G19370 66.346 9.42e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01348 - - gmx:100803404 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01348 7 21804219 21807504 Vian7g01348 7 21804219 21807504 ECH