Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian7g01291 | ATGCCCAACACTCGTACCCTTTTTCTGTTAGGATGGATTTTGGCACCTAACAACCAGAGGAGAAGACAATCACAAGGCACGCACGAGCTTCACCACGGTCTGCTGCGATCGCAGCCCTTGCTGTCGTCGACCCTCTCTGTCCTCGCCGCCGATGCACGTCGTCTTGCTGCCCTCACAGCTGCTCTTATTTTCTCCCCGCCTCTGTATGTTCTTCGTGGATGTAATCTTTTTGAATTTCTCCTCGCAATCGCCTCTGTATATATGAATCGTTTTGAAGCCTCTCCCAAGTGTCTCTTGCTCAAGGTTTTTGATTCTGGTTCATTCTCTCAAGCTGCTTTTGAGTTCGTCTTCACTCTTAACTCTAAGGGTCACACTCTTGACTTTGGTGCTGCGGTTGGGGAAACAGTGCCTTTGTGGAACTTTGCTTATTTGAGCTTGTCAACCAGTTGTTTGACTCAATTGGAACCTATGGTATTTGGGGTCATGGATAACTCAAATGATTCATCATCATCCTTGAGTTTTGTATCATCTCACCTCTCACATGGTTCTAGTAATCACAACGCGTCTTCCTCTACCAGCAATGAGCATGTGGCAAATATTGAAATTTTGACTCTGAGTAAGCTCAGTGGAGGCCTTGAGAAGTTACTGATTGATGCTGAATATGATTATAGTGATGCTGAGATTCTCGTTGAAGACATGTGTGTGGGTGTTCATCGCTGTATATTGGCCTCGCGTAGTCCTTTTTTTCATGAGCTTTTTAAAAAAGGAACGGGTGGATCAGGGAAGGAAGGAAAACCAAGGTATCTCATGTCAGAATTGGTGCCTTATGGCACAGTTGGATATGAATCTTTCCAAGTTTTCTTGCACTATTTGTACACTGGAAAGCTAAAAGCTTCGCCAACAGAAGTGACAACATGTGTTGATGAAACATGTATCCATGATGCATGTCGCCCTGCTATCAATTATGCATTGGAGCTGATGTATGCTTCTGCCACTTTTCAGATGAAAGAGCTAGTTTTACTTTTTCAGCGGCATCTGCTAAACTTTGTTGAGAAGGCTCTTGTGGAAGATGTGATTCCTATTCTTTTGGCTGCTTTCAACTGCCAAATAGACCAGCTTCTCTCTCGGTGCATTCACAGAGTTGCAAGGTCTGACTTTGACATCATATCTTTGGAAAAAGAGCTCCCTTATGAAGTTGTGACTGAAATCAAATCGTGCCGTCTCTCATCTCAGCCAGAATCGGCAGCTGATACAATGGAAGTGGAGCCTTTGAGTGAAAAGAGTATCAGGAGAATCCATAAATCATTGGACTCTGATGATGTTGAGCTACTGAAGCTTCTTCTAAATGAGTCTAGGGTCACTCTAGATGATGCATATGCGCTGCACTATGCCTGTGCCTACAGTGATTCTAAGGTTATTCAAGAAGTTCTTGGTCTAGGTATGGCTGATATTCTTCGGAGAAATTCCCGAGGATACACGGTTCTTCATGTGGCTGCAAGGCGAAAGGATCCATCCATTTTGGTGGCACTGCTGAATAAAGGGGCATGTGCAACAGATACCACTCCAGATGGTCAAACTGCTCTTTCAATTTGTCAGAGGTTGACAAGACGCAAGGATTATCATGAGAAAACAGTGCAGGGTAAGGAATCTAACAAGGATAGACTCTGTGTTGATCTCCTTGAGAGGGAGATGAGAAGAAGTTCTATGACTGTGAGTATGTCTGTATCATCACAGTTAACAGCTGATGATTTGCACATGAGACTGGATTACCTTGAAGATAGAGTGTTATTTGCTCGGTTGTTGTTTCCTGCTGAGGCTAGGGTAGCCATTGAGAATGCTGAGGCAGATTCTTCATCACTGTACGCAAACGAATCAGCATTGAAGGGCACAAATGGAAAGCTAAAAGAAGTTGATCTAAATGAATCTCCCTCTGCTCGAGCCAGAAAACTTCAGTTAAGACTGCATGCCCTTATGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGTTCAGAAGTGCTTGATAAGTTTCTGGAAGATGATATGCCAGATGTGTTCTTCCTAGAGAAAGGCAGTGAAGAAGAGCAGAGAATGAAGAAAGCACGATTCATGGAACTTAAAGATGATGTTCAGAAAGCATTTCACAAAGATATGGCTGAAAATAACCATTCAGCATTTTCATCTTCAGTGTCCTCTTCATCATCTTCTACTCGGAGGGAAGGTCTTAACCACAGAGTGAGGAGAAAATGA | 2253 | 0.4341 | MPNTRTLFLLGWILAPNNQRRRQSQGTHELHHGLLRSQPLLSSTLSVLAADARRLAALTAALIFSPPLYVLRGCNLFEFLLAIASVYMNRFEASPKCLLLKVFDSGSFSQAAFEFVFTLNSKGHTLDFGAAVGETVPLWNFAYLSLSTSCLTQLEPMVFGVMDNSNDSSSSLSFVSSHLSHGSSNHNASSSTSNEHVANIEILTLSKLSGGLEKLLIDAEYDYSDAEILVEDMCVGVHRCILASRSPFFHELFKKGTGGSGKEGKPRYLMSELVPYGTVGYESFQVFLHYLYTGKLKASPTEVTTCVDETCIHDACRPAINYALELMYASATFQMKELVLLFQRHLLNFVEKALVEDVIPILLAAFNCQIDQLLSRCIHRVARSDFDIISLEKELPYEVVTEIKSCRLSSQPESAADTMEVEPLSEKSIRRIHKSLDSDDVELLKLLLNESRVTLDDAYALHYACAYSDSKVIQEVLGLGMADILRRNSRGYTVLHVAARRKDPSILVALLNKGACATDTTPDGQTALSICQRLTRRKDYHEKTVQGKESNKDRLCVDLLEREMRRSSMTVSMSVSSQLTADDLHMRLDYLEDRVLFARLLFPAEARVAIENAEADSSSLYANESALKGTNGKLKEVDLNESPSARARKLQLRLHALMKTVENGRRFFPHCSEVLDKFLEDDMPDVFFLEKGSEEEQRMKKARFMELKDDVQKAFHKDMAENNHSAFSSSVSSSSSSTRREGLNHRVRRK | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian7g01291 | 750 | MobiDBLite | consensus disorder prediction | 715 | 750 | - | - | |
| Vian7g01291 | 750 | FunFam | BTB/POZ domain and ankyrin repeat-containing protein NPR1 | 397 | 554 | - | - | |
| Vian7g01291 | 750 | SMART | BTB_4 | 224 | 350 | IPR000210 | GO:0005515 | |
| Vian7g01291 | 750 | FunFam | Regulatory protein NPR3 | 198 | 382 | - | - | |
| Vian7g01291 | 750 | ProSiteProfiles | BTB domain profile. | 224 | 300 | IPR000210 | GO:0005515 | |
| Vian7g01291 | 750 | Pfam | Domain of unknown function (DUF3420) | 385 | 433 | IPR024228 | - | |
| Vian7g01291 | 750 | Gene3D | Potassium Channel Kv1.1; Chain A | 188 | 382 | IPR011333 | - | |
| Vian7g01291 | 750 | CDD | BTB_POZ_NPR_plant | 207 | 350 | - | - | |
| Vian7g01291 | 750 | Pfam | NPR1/NIM1 like defence protein C terminal | 532 | 734 | IPR021094 | - | |
| Vian7g01291 | 750 | Pfam | BTB/POZ domain | 221 | 308 | IPR000210 | GO:0005515 | |
| Vian7g01291 | 750 | ProSiteProfiles | Ankyrin repeat region circular profile. | 490 | 515 | - | - | |
| Vian7g01291 | 750 | Pfam | Ankyrin repeats (3 copies) | 439 | 518 | IPR002110 | GO:0005515 | |
| Vian7g01291 | 750 | SUPERFAMILY | POZ domain | 221 | 348 | IPR011333 | - | |
| Vian7g01291 | 750 | ProSiteProfiles | Ankyrin repeat profile. | 490 | 515 | IPR002110 | GO:0005515 | |
| Vian7g01291 | 750 | PANTHER | REGULATORY PROTEIN NPR3 | 183 | 741 | IPR044292 | GO:0009862|GO:2000022|GO:2000031 | |
| Vian7g01291 | 750 | SMART | ANK_2a | 490 | 519 | IPR002110 | GO:0005515 | |
| Vian7g01291 | 750 | SMART | ANK_2a | 456 | 486 | IPR002110 | GO:0005515 | |
| Vian7g01291 | 750 | Gene3D | - | 424 | 564 | IPR036770 | - | |
| Vian7g01291 | 750 | MobiDBLite | consensus disorder prediction | 722 | 740 | - | - | |
| Vian7g01291 | 750 | SUPERFAMILY | Ankyrin repeat | 430 | 533 | IPR036770 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian7g01291 | Vian-Chr7 | 21136539 | 21144096 | Dispersed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | TRAF | Vian7g01291 | NPR1_like_C | 2.5e-83 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian7g01291 | K14508 | - | gmx:100814739 | 951.814 |