Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01287 ATGGAAGAACTGCAAAAGACACTTTTATCTGAGATGTTAGAGGAGTCGGAAACTAAGTTGGGAAGTACCAATAAAGGAATATATGAAATAAAACGAAAGCTTTTCCGAAAGAAAGTTCTTTTGGTTCTTGACGACGTTGACGATAAAGAGGAGTTAGAAAATTTGGCAGGAGGGTGTGATTGGTTTGGTGCAGGTAGTAGGATTATTATAACGACAAGGGAAAAAGATGTCCTGATTGCTCACCATGTTGGAAATATTTATGAAATGAAGGAACTTGATGAACAACATTCTTTGGAGCTCTTTTGTTGGAATGCCTTCGGACAAGGTTGTCCTAAAACAGGTTTTCAAGATGTGTCTATGCGTGCTGTAGATTACGCCAAAGGTCTTGCACTGGCTTTAAAAGTGATAGGCTCTGACTTAGCTACTCTTCATGAAGAAAGTTTAGATGCCTGGGAAGATGCATTGGAAGAATATGAGAAGACTCCTCCGAATAAAAAGATTCAAGATGTGCTTAAAATAAGCTACGATAGATTGGATGATGATGTCAAACAAGTTTTCTTGGACATAGCTTGCTTCTTTAAAGGGGAGAGAATGAAATATGTGAAAAAGATACTTAAGGAATTTTGTTCAACATCCAACATGAAAGTACTTGTCAATAAATCACTCATAACTGTCAAGAATGACAGACTGAAGATGCATGATCTAATACAAGATATGGGTAGACAGATTGTTAGACAGGAAGCACCAGATAATCCTGGAGAACGTAGCAGAATATGGGATTATGAAGATGTCATTGAAATACTAACAGAAGATTTAGTAATCATCTACTTTTTTACTCTGTTTTTTTATTTATACATTATAGTATTTTATATTAATGATAATATGCAATTGATATGTTGGTTCTTTGTACTCGTGTTAAAGGGAAGTGATAAGATTCAAGGGATTAAGCTAGATCCTCCTAAGCAAGCAGAAGTAATATGGAGTCGCACTGAGTTTGGGAAAATGAAATGGCTCAGAATTCTCATTGTTCGAAACACATCATTTTCATCTGAACTTCAACATTTACCAAATCATTTAAGACTACTTGATTGGGATAACTATCCTTCAAAGTCTTTCCCCCAAAAATTCCATCCAAAGAAAATCGTTGTTTTCAATTTGCCTAGAAGTTGTCTAACATTCAAAGAGCCATTCAAGTGTTTCAGAATGCACAAAACTTCAAAATTTCCTGTCCAGAATGTTTCTACCATCTTTAGAAGTCTTTGA 1263 0.3539 MEELQKTLLSEMLEESETKLGSTNKGIYEIKRKLFRKKVLLVLDDVDDKEELENLAGGCDWFGAGSRIIITTREKDVLIAHHVGNIYEMKELDEQHSLELFCWNAFGQGCPKTGFQDVSMRAVDYAKGLALALKVIGSDLATLHEESLDAWEDALEEYEKTPPNKKIQDVLKISYDRLDDDVKQVFLDIACFFKGERMKYVKKILKEFCSTSNMKVLVNKSLITVKNDRLKMHDLIQDMGRQIVRQEAPDNPGERSRIWDYEDVIEILTEDLVIIYFFTLFFYLYIIVFYINDNMQLICWFFVLVLKGSDKIQGIKLDPPKQAEVIWSRTEFGKMKWLRILIVRNTSFSSELQHLPNHLRLLDWDNYPSKSFPQKFHPKKIVVFNLPRSCLTFKEPFKCFRMHKTSKFPVQNVSTIFRSL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01287 420 Gene3D - 1 84 IPR027417 -
Vian7g01287 420 Coils Coil 141 161 - -
Vian7g01287 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 189 IPR027417 -
Vian7g01287 420 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 392 IPR044974 GO:0006952
Vian7g01287 420 Pfam NB-ARC domain 2 175 IPR002182 GO:0043531
Vian7g01287 420 Gene3D - 91 179 IPR042197 -
Vian7g01287 420 SUPERFAMILY "Winged helix" DNA-binding domain 165 268 IPR036390 -
Vian7g01287 420 PRINTS Disease resistance protein signature 126 140 - -
Vian7g01287 420 PRINTS Disease resistance protein signature 33 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01287 Vian-Chr7 21111983 21113538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01287 8 391 WRKY Transcription Factor Family AT5G45050 34.430 3.98e-51 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01287 - - var:108320708 620.928