Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01285 ATGGGAAAACATGGTGAGGAAGAAGAGTGTTCACGCTACGATGTGTTCATTAGTTTTAGAGGAGAAGATATTAGGAACACCTTTCTACGGCAGCTCCGTGAAGGGTTGGGTAGGAGGGGAATACTCAGTTTCCATGATGACAGGGATATGAGGATAGGGACAGGTCTTTCACTTGCTCTGCGTGAGGCCATTGCAGAATCTAATGTTTTCATAGTTGTGTTTTCTGAGAACTATGCATCTTCCACATGGTGTCTCGATGAACTTGTTAAGATTATCCAACGCACCCACATGAACAGTAAGCAAATTTTTTTTCTTCCAGTGTTCTACCATGTAGATCCCTCAGATATACAGAAAATCAGAAATAGTTTTGGAAAACACATGACGGCACACGAAGAGTTTGGAGAAGAGCCGCAGAAAGTGCAGGCTTGGAGGTCTGCTTTGTCTGAAGCAGCTAACTTGCCAGGGATGCATATTACCACCACCACCAGGTCTGAAAAGGATTATATTGAAGAAATTGTTGGGAAGATCCAAAGGAATCTAGGTCGTAAACCTTTACATACTGGGCAGAACCCTCTTGGACTTGAGCCCCACATAGAAAAGGTTATGTCACTTTTGGACATTGATGACAACACTGTAAAAATGTTGAGCATATGTGGACTTGGTGGAATTGGAAAAACGGAACTTGCCAAAGCTTTGTATAACAAAATTGTGCGACACTTTGATGCTGCAAGTTTTCTTGCCGGTGTTAGAGAAAAATCAAACACAATCAATGGCATGGAAGATCTACAGAAGACACTTCTGTCTGAGATGTTTGAGGAGTCGGAAACTAAGTTGGGAAGTACCAATAAAGGAATTTATGAAATAAAACGAAAGCTTCGCCGAAAGAAAGTTCTTTTGGTTCTTGACGACGTTGATGATAAAGAAAAGTTAGAAAAGTTGGCAGGAGGGTGTGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACGACAAGGGAAAGAGATCTCCTAATTGCTGGAAATGTTTATGAAATGAAGGAACTTGATGAACAACATTCTTTGGAGCTCTTTTGTTGGAATGCCTTCGGACAAGATTGTCCTAAAACTGGTTTTGAAGATGTGTCTATGCGTGCTGTAAATTACGCTAAAGGTCTTCCACTGGCTTTAAAAGTGCTAGGCTCTGATTTAGCTACTCTTCATGGAGGAAGCTTAGATGCTTGGGAAGATGCATTGGAAGAATATAAGAAGACTCCAAATAAAAAGATTCAAGATAATGTGCTTCAAGTATGCTACGATAGATTGGATGATGATGCCAAACAAGTTTTCTTGGACATAGCTTGCTTCTTTAAAGGGGAGAAAGTGGAATGCGTGAACAAAATACTTGAGGAATTTTATTCAGAATCCAAAATGAATGAACTTGTTAATAAATCTCTCATAACTATCGACAATGGCTGCCTCAAGATGCATGATCTAATACAAGATATGGGTAGACAGATTGTTAGGCAGGAAGCACCAAATCCTGGTAAACGTAGCAGAATATGGGATTATGAAGATGTTCTTCAAATACTAACCGAAGATTCAGTAATCGTCTACTTTTTTACTCTATTTGGTTTTTATTTATACATTATAGTATTTTATATTAGTGATAATATGCAATTGATGTTGGTTCTTTGTACTTGTGTTAAAGGGAAGTGA 1692 0.3901 MGKHGEEEECSRYDVFISFRGEDIRNTFLRQLREGLGRRGILSFHDDRDMRIGTGLSLALREAIAESNVFIVVFSENYASSTWCLDELVKIIQRTHMNSKQIFFLPVFYHVDPSDIQKIRNSFGKHMTAHEEFGEEPQKVQAWRSALSEAANLPGMHITTTTRSEKDYIEEIVGKIQRNLGRKPLHTGQNPLGLEPHIEKVMSLLDIDDNTVKMLSICGLGGIGKTELAKALYNKIVRHFDAASFLAGVREKSNTINGMEDLQKTLLSEMFEESETKLGSTNKGIYEIKRKLRRKKVLLVLDDVDDKEKLEKLAGGCDWFGPGSRIIITTRERDLLIAGNVYEMKELDEQHSLELFCWNAFGQDCPKTGFEDVSMRAVNYAKGLPLALKVLGSDLATLHGGSLDAWEDALEEYKKTPNKKIQDNVLQVCYDRLDDDAKQVFLDIACFFKGEKVECVNKILEEFYSESKMNELVNKSLITIDNGCLKMHDLIQDMGRQIVRQEAPNPGKRSRIWDYEDVLQILTEDSVIVYFFTLFGFYLYIIVFYISDNMQLMLVLCTCVKGK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01285 563 Gene3D - 10 180 IPR035897 -
Vian7g01285 563 Pfam NB-ARC domain 195 419 IPR002182 GO:0043531
Vian7g01285 563 PRINTS Disease resistance protein signature 214 229 - -
Vian7g01285 563 PRINTS Disease resistance protein signature 381 395 - -
Vian7g01285 563 PRINTS Disease resistance protein signature 291 305 - -
Vian7g01285 563 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 182 - -
Vian7g01285 563 Pfam TIR domain 13 183 IPR000157 GO:0007165
Vian7g01285 563 Gene3D - 181 342 IPR027417 -
Vian7g01285 563 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 155 IPR035897 -
Vian7g01285 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 444 IPR027417 -
Vian7g01285 563 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
Vian7g01285 563 Gene3D - 346 434 IPR042197 -
Vian7g01285 563 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 522 IPR044974 GO:0006952
Vian7g01285 563 SMART till_3 12 153 IPR000157 GO:0007165
Vian7g01285 563 SUPERFAMILY "Winged helix" DNA-binding domain 424 522 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01285 Vian-Chr7 21067871 21072959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01285 13 526 WRKY Transcription Factor Family AT4G12020 30.435 2.65e-54 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01285 - - var:108338187 928.317