Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01283 ATGTACATCACCTCCCCATCACCTCCATCGCTATTATTACTCACTGGCAAAACACTTGGCTCTTTAGGCCCTTTCATGACATTGGCTCATGACAAGGCCTCGCTTCGCAGCTGGTACCAACTGAAAGATGCAATTTTGGAAGGAGGTATTCCATTCAACAGGGCCCATGGCAAACACTTGTTTGAATACTCTGATATGAACCCAAGCTTCAATAATCTTTTTACTGCAACAATGACCAACCATGCAACTATCATAATGAATAAGATTGTGGAATCCTACCATCGCCACCATGTCCACTTCGCCTTCCAGAAGGACCCAAGTTCCCAACCCGCTTTCCTCAACGAGCTTGCAACACCCATAATCGGTTTGGTTCGGGAAATGGCTTCTGGGCTGGTCCGAATCGCGCTGAAATGCGATAAGGACAAAGAGTCAGAGAAGAAGAGTTTGAGGTTGCTTCAGGAGTCTGTGTGGAGGACCTACTGCAACGGCAAAAAGTGTGGCTTTGCCACCATAAGAGAATGTGGAGCGAAAGACTGGGAAATCCTGAAGGCCGTGGAGCCAATTTCAATGGGTGCAGGTGTTTTGCCAGTGAGTAATAATAGCGATGGAGGTGATGGGGAGGAGCAAAGAAGAAGTGCTGTCATGCATGGAGAGAAACCGCAAGAAGGAGCAGAAGAAGATTCACGGGTCTAG 693 0.4762 MYITSPSPPSLLLLTGKTLGSLGPFMTLAHDKASLRSWYQLKDAILEGGIPFNRAHGKHLFEYSDMNPSFNNLFTATMTNHATIIMNKIVESYHRHHVHFAFQKDPSSQPAFLNELATPIIGLVREMASGLVRIALKCDKDKESEKKSLRLLQESVWRTYCNGKKCGFATIRECGAKDWEILKAVEPISMGAGVLPVSNNSDGGDGEEQRRSAVMHGEKPQEGAEEDSRV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01283 230 NCBIfam uncharacterized plant-specific domain TIGR01570 93 207 IPR006460 GO:0010274
Vian7g01283 230 Gene3D Vaccinia Virus protein VP39 17 103 IPR029063 -
Vian7g01283 230 MobiDBLite consensus disorder prediction 204 230 - -
Vian7g01283 230 Pfam O-methyltransferase domain 38 94 IPR001077 GO:0008171
Vian7g01283 230 PANTHER PROTEIN MIZU-KUSSEI 1 93 201 IPR006460 GO:0010274
Vian7g01283 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 93 IPR029063 -
Vian7g01283 230 MobiDBLite consensus disorder prediction 193 230 - -
Vian7g01283 230 Pfam Protein of unknown function, DUF617 93 206 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01283 Vian-Chr7 21049908 21053291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01283 21 93 Monolignol Biosynthesis Gene Families AT5G54160 50.685 1.62e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01283 - - var:108346646 332.413