Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01280 ATGAGGGCACATGAAATTACGTTTGGAAAACAGTCCCAGAGAATGCAGGCTTGGAGGTCTGCTTTGTCTGAAGCAGTTCACTTGCCAAGGAAGCATATTACCACCGGGTGTGAAAACAATTTTATTGAAGAAATTGTTAGGGAGGTGTATAAGAATATAGCTCCTAAACCTTTATATACGGGTCAAAACTCTCTCGGACTTGAGTCCCACATAGAAGAGGTTAAGTCACTTTTGGACATTAAGCCTGATGACAACACTGGAAGTGATAAGATTCAAGGGATTATGCTTGATCCTCCTCAACAAGAAATGGTAAAATGGAGTGGTACTGAGTTTGAGAAAATGAAATGGCTCAGAATTCTCATTGTTCGAAACACATCCTTTTCATCTGAACCTGAACATTTACCAAATCATTTAAGACTGCTTGACTGGGACAACTATCCTTCAAAGTCTTTCCCACCAAAATTTCATCCAAAGAAAATCGTTGTCTTCAATTTGCCTAGAAGTTGTCTAACATTGGAAGGGCAGCCATTCAAGAAATTTCCATGCTTGACTAATATGGACTTTTCATATAACCAACGTATCATCGAAATACCTTATGTGTCCGAACTTCAGAATCTAAGAGAATTGAGACTTGATTATTGTAGAAACCTAATTGCAGTCCATGAATCTGTTGGATTTTTGAAAAGGCTTTCTCATTTAAGTGTTTCAGAATGCAAAAAACTTCAAATTTTCATGTCCAGAATGTTTCTACCATCTCTACAAATCTTTAATCTTAACTTTTGTGAAAGCCTTGGTCACTTCCCAGAGATAATGAAAGAGATAATGAAAGAAATGACAAAGCCATTGAAGATTCATATGATAAATACTGCTATTCAAGAGCTTCTAGAATCCATTAGTAAATTTACTGGGCTTGTTTCCATAGACATATCGAATAACAGGAAACTTAAAAATCTACCGAGAAGTTTATTCATGTTGCCAAATGTTGATTCTTTCATAATCAAAGCATGTTCCAAACTTGGAGAATCCATTCGAAGTTTGGTGCAACACCATTCAAAAGCCAATGTTCATAAAAAATTACGATTACTGAATTTCGAAAATGGTAACTTGTCTGATGAAGATCTTCTTGCAATTATTTGTCACTTTCCAAAATTAGAAGAATTGATTGTTTCAGAGAACAATTTTGTATCTATCCCTTCATGCATAAAGGAATGTGGTGACTTGACAAGTCTCGATTTGAATGGATGTAAGAAGCTTAAAAAAATTCCTGAACTCACTAGCTTGAGAATTCTTGATGTTCATGATTGTCTATATCTCGAAGAAATTTCAAAGTTGCCGTCTACTATTCAGAAAGTAGATGCAAGATTTTGTTTCAAGTTAACAAAAGAGACATCAGACGTGTTATGGTATCAGGTGAAGAAAGGGGTAGGAGGAATAGAAATGGTGATCCCATTTATAACAGGGATTCCAGAATGGTTTAACTTTGTGGGGGTAGGAAGGATTCCTCGTTTCTGGGTTCGTGGCAAGTTCCCTAAGATGGTTGTAGCGATGATCTTCCACTTCCAAAATGAGAGTCAAAGGGACAGATTTGATGGTCGTGGCCTTGTTGATCTGCGTTTACTAATCAACGGTCGATACGCTCCTCGAAAAGGGTATCAGAACTTTAGAATTGAGGCAGAGCACATCTTGTTGTGTGATGTAGGAGTTTTGTGCAGTGAGAAGGAGTGGGTTGGCAATGCAGTTATGGAGCATGAGTGGAATCTGGTGGAGGTTTCGTATGATGCGACGTCGTCGTTGATGATAAGTGGTTGGGGAGCGTTTGTGTTTGAAGAAGGAACGAATATGGAAGATCTCCTGTTCGCTAGTCCCAATAACTTGATTGTGAACGGAGATTCAACCTTTGTCCATAAGGGAAGTTTGGAGGACGACGAAAACTACGTTGGTCTTCCGGAAGGAATAGCATGGGAATCCTTGTTTGAAGGAATAAAGGATGGAATTGTTGAGGCATGGAATAAGTTTCCTTCTATGGATGTTGCTGAAATCTGTGTGGCTGCCTTGAAGAAGAATCGTAAGATTGAATGGACAGTTGAAGGGATGGAGGGAATACCCTCAGCTGAAAACAGGACGTACATGAGTGGACTTTACGGTGTACTCTTGGAAGCAAAACTCAGATTTCCTGATTTGGACGTTGGGGCAGCACTAACTAATGTGACAAATAGGAAAGGGATTAAAGGAACTTTTGGATCACCCGCAAAACCAGAGATGACAATTCCAAAATTGGATTGGAGTACGGTGACACTTCCTCCTTCTCATGACCCTCTGATGCAAATATTCATGATGATGATGAAGCAGCAAAGTACTTCGGAATCCGAACTCAAAACTAAAACCTTCTGGAAGTTGAAGGAGAGCCACCAAATTCTCCGCAACAGATTGTCACATAAGACTGCTGCTCAGAACTCAGGCAGCTCTTCAAAAAATCAATATGACGAACTGATTCAGAAATTCAACATGCAATATGATGTGTTTGTTGGGAAGAGAGTAGACAACCTTTATGGTGTGGCAAAGCATGAGAAGGATAGTGGTGTTTTGAAAGAAAGAGCTAAAGAAATTGAGAGGGAATTGGAGGCTGTGGTTGGGTGGCTCCAAAATTCAGAGGAGTTTGGAGATGTAATGACTGCAATGTTCTTGAATGGACTCAGGGATGGAATCCTTGAGGCACGGGCCATCATGAACGTGTCACCGATGAGGCTCCTAACAGTGAAAACATTGCCTAGCATATTTGTTTAA 2784 0.3951 MRAHEITFGKQSQRMQAWRSALSEAVHLPRKHITTGCENNFIEEIVREVYKNIAPKPLYTGQNSLGLESHIEEVKSLLDIKPDDNTGSDKIQGIMLDPPQQEMVKWSGTEFEKMKWLRILIVRNTSFSSEPEHLPNHLRLLDWDNYPSKSFPPKFHPKKIVVFNLPRSCLTLEGQPFKKFPCLTNMDFSYNQRIIEIPYVSELQNLRELRLDYCRNLIAVHESVGFLKRLSHLSVSECKKLQIFMSRMFLPSLQIFNLNFCESLGHFPEIMKEIMKEMTKPLKIHMINTAIQELLESISKFTGLVSIDISNNRKLKNLPRSLFMLPNVDSFIIKACSKLGESIRSLVQHHSKANVHKKLRLLNFENGNLSDEDLLAIICHFPKLEELIVSENNFVSIPSCIKECGDLTSLDLNGCKKLKKIPELTSLRILDVHDCLYLEEISKLPSTIQKVDARFCFKLTKETSDVLWYQVKKGVGGIEMVIPFITGIPEWFNFVGVGRIPRFWVRGKFPKMVVAMIFHFQNESQRDRFDGRGLVDLRLLINGRYAPRKGYQNFRIEAEHILLCDVGVLCSEKEWVGNAVMEHEWNLVEVSYDATSSLMISGWGAFVFEEGTNMEDLLFASPNNLIVNGDSTFVHKGSLEDDENYVGLPEGIAWESLFEGIKDGIVEAWNKFPSMDVAEICVAALKKNRKIEWTVEGMEGIPSAENRTYMSGLYGVLLEAKLRFPDLDVGAALTNVTNRKGIKGTFGSPAKPEMTIPKLDWSTVTLPPSHDPLMQIFMMMMKQQSTSESELKTKTFWKLKESHQILRNRLSHKTAAQNSGSSSKNQYDELIQKFNMQYDVFVGKRVDNLYGVAKHEKDSGVLKERAKEIERELEAVVGWLQNSEEFGDVMTAMFLNGLRDGILEARAIMNVSPMRLLTVKTLPSIFV 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01280 927 Gene3D Ribonuclease Inhibitor 276 467 IPR032675 -
Vian7g01280 927 Coils Coil 852 872 - -
Vian7g01280 927 PANTHER LEUCINE-RICH REPEAT-CONTAINING 252 529 - -
Vian7g01280 927 SUPERFAMILY L domain-like 94 459 - -
Vian7g01280 927 Gene3D Ribonuclease Inhibitor 30 275 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01280 Vian-Chr7 20966101 20970604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01280 84 388 WRKY Transcription Factor Family AT4G12020 31.889 2.04e-32 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01280 - - var:108338187 1243.8