Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01279 ATGAAATGGCTCAGAATTCTCATTGTTCGAAACACGTCCTTTTCATCTGAACTTCAACATTTACCAAATCATTTAAGACTACTTGACTGGGACAACTATCCTTCAAAGTCTTTCCCTACCAAATTCCATCCAAAGAAAATCGTTGTTTTCAATTTGCCTAGAAGTTCTCTAACATTCCAAGAGCCATTCAAGAAATTTCCATGCTTGACTAATATGGACTTTTCCTATAACCAACGTATCCTCGAAATGCCTGATGTGTCCGAACTTCAGAATCTAAGAGAACTGAGACTTGATCATTGTAGAAACCTAATTGCAGTGCATCAATCTGTTGGATTTCTGAAAAGGCTTTCTCATTTAAGTGTTTCAGAATGCACAAAACTTCGAAATTTCCTGTCCAGAATGTTTCTACCATCTTTAGAAGTCTTTGATCTTAATCTATGTGAAAGAGTTGGTCACTTCCCAGAGATAATGCAAGAAATGACAAAGCCATTGAAGATTTATATGATAAATACGGGTATTCAAGAGCTTCCAGAATCCATTAGTAAACTTATTGGGCTTGTTTTTATAGACATGTCCAATAACAGGCAACTTAAATATCTGCCAAGCAGCTTATTCATGTTGCCAAATGTTGATTCCTTCAAAATCGAAGCATGTTCGAAACTTGGAGAATCCTTCAGATGTTTGGTGCCACACCCTTCAAAAGCCAATGTTCGTCCGAAATTACGATCACTGAATTTCCAAAAGGGTAACTTGTCTGATGAAGATCTTCTTGCGATTCTTTGCAACTTTCCGAAATTAGAAGAATTGATTGTTTCAGAGAACAATTTTGTATCTATCCCTTCATGCATCAATGAATGTGGTGACTTGACAAGTCTCGATTTGAATGGATGTGAGAAGCTTAAAAAAATTCCCGAACTCACTGGCTTGAGAATTCTTGATGTTCATCATTGTTTCTCCCTTGAAGAAATTTCAGAGTTGCCGTCTACTGTTCGGAAAGTAGATGCAAGATTTTGTTCCAAGTTAACAAACAAGACATCAGACATGCTATGGTGTCAGGTGAAGAAAGGGGTTGGTGGAATTGAAATGGTGATGCCACTTATAACTGAGATTCCAGAATGGTTTAATTTTGTGGAGGTCGGAACGATTCCAGGTTTCTGGGTTCGTGGCAAGTTCCCTAAGATTGTTCTGGCCATGATCTTCCACTTCCCAAATCAGAGTCAAAGCGACGAATTTGTTCGCCGTCGCCATGTTGATCTGCGTTTAGTTATCAACGGTCGAAATGCTTTTGGCAAAGGGTATCACAACTTTATAATTGAAGCAGAACACGTGTTGATCTGTGATCTACGAGTTTTGTTCAGTGAGAAGGAGTGGTTTGGCCTTGATGCACTTCTGGAGAAGGAGTGGAATGTGGTGCAGGTTGAGTATGAAGCCACTTCGTCCTTGATGATAAGTAGTTGGGGAGCGTTTGTGTATGAAGAAGGAAGCAATATGGAAGATCTCCTATTCAATTGTCCCAATCACATGGACTCGGAGAAGATGCCACCGGCAATAGTTGCTGAGAAAGATCCTATGGAGAAATATAAAAAGAGGATACGGGAGCTACGTCTAGACGAAACATTTAAGAACACGTTGACGGAATGGCAGGAGAACAAAGAAAGAGGAGTGAGGTGTCATGACGATTGCATGCGTGTGGCATTGGGACAAATAAAGAAGATATCAGAGGATGCTGAGGATGCATTGAGTTCAAAAGGGTCAGCTTTAGAAGATCCAAACTCCTACCTGAGGTGGCTTCTAGATACGATGGAAAATGATGATGGAAAGCCTAAAGAGATTATCAAAGGTGATCTGGCGTTGGTAAGACTAGAGAAACCAGTGACAGGGAAGAAGAAGGATAACGTAGGAGAAGCTTCAAGCTCTGGCCATCAGGAAAGCAAGGAGGAGGAAGAAGGCTACGATCCTCAACTGGATATCCCTTTTTATACTGATTTTGTCAGAAAACAAACAGTAGACGATTCTCTGCCGGAGGACATAGTGATGGAATTATTCTGTGAAGGAATGAGGGATGGACTTGTTGAGGCACAGAATGAATTTCCTTCTCTTGATATTGCTGAAAGCAGTAACGCTGTGTTGGAGAAGGGTTATGAGGTTAGATGGGCACCTGAAGTAGAAATATCGGTTCAAAGTAGGATATACATGACTGGAATTTACTCTGGACTCAAAGAAGCAAAGCTGAGGTTTCCTGATTTGGACATGTGGGCAACAATAAATACTGTGGCAAAAAGGAAAGGGATCGAAGGATTTTTTTATCACCCTCTCAAGAAAACCTGGAGTTTCCACGTTTAG 2343 0.4046 MKWLRILIVRNTSFSSELQHLPNHLRLLDWDNYPSKSFPTKFHPKKIVVFNLPRSSLTFQEPFKKFPCLTNMDFSYNQRILEMPDVSELQNLRELRLDHCRNLIAVHQSVGFLKRLSHLSVSECTKLRNFLSRMFLPSLEVFDLNLCERVGHFPEIMQEMTKPLKIYMINTGIQELPESISKLIGLVFIDMSNNRQLKYLPSSLFMLPNVDSFKIEACSKLGESFRCLVPHPSKANVRPKLRSLNFQKGNLSDEDLLAILCNFPKLEELIVSENNFVSIPSCINECGDLTSLDLNGCEKLKKIPELTGLRILDVHHCFSLEEISELPSTVRKVDARFCSKLTNKTSDMLWCQVKKGVGGIEMVMPLITEIPEWFNFVEVGTIPGFWVRGKFPKIVLAMIFHFPNQSQSDEFVRRRHVDLRLVINGRNAFGKGYHNFIIEAEHVLICDLRVLFSEKEWFGLDALLEKEWNVVQVEYEATSSLMISSWGAFVYEEGSNMEDLLFNCPNHMDSEKMPPAIVAEKDPMEKYKKRIRELRLDETFKNTLTEWQENKERGVRCHDDCMRVALGQIKKISEDAEDALSSKGSALEDPNSYLRWLLDTMENDDGKPKEIIKGDLALVRLEKPVTGKKKDNVGEASSSGHQESKEEEEGYDPQLDIPFYTDFVRKQTVDDSLPEDIVMELFCEGMRDGLVEAQNEFPSLDIAESSNAVLEKGYEVRWAPEVEISVQSRIYMTGIYSGLKEAKLRFPDLDMWATINTVAKRKGIEGFFYHPLKKTWSFHV 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01279 780 Gene3D Ribonuclease Inhibitor 1 166 IPR032675 -
Vian7g01279 780 Gene3D Ribonuclease Inhibitor 167 352 IPR032675 -
Vian7g01279 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 10 162 - -
Vian7g01279 780 SUPERFAMILY L domain-like 6 325 - -
Vian7g01279 780 MobiDBLite consensus disorder prediction 629 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01279 Vian-Chr7 20954425 20957390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01279 11 221 WRKY Transcription Factor Family AT4G12020 36.818 6.35e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01279 - - vun:114193909 1238.4