Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01261 ATGTCTTCACTAAATAGGCAACCTTCGAAGAAATCATTACGAAACAGTGGAGGATTATCCGGTGGTCCTCAAGTAGGAAGTACTTCCGGTGGACCATCTGTTAAATTTGCAAGAAGAACTTCAAGTGGGAGATACGTGAGTCTGTCAAAAGATGACATTGACATGTCCTCGGACTTATCAGGGGATTATATGAACTACACCGTTCATATACCTCCCACCCCTGACAATCAACCCATGGACACATCTATTGCAATGAAAGCCGAAGAACAGTATGTTTCCAATTCTTTATTCACCGGGGGATTCAACAGTGTAACCAGAGCACATCTTATGGATAAGGTAATCGATTCTGAAGTAACTCATCCTCAAATGGCAGGCTCCAAAGGCTCTGCATGTTCAATTTGTGATGGCAGGGTCATGAGGGATGAAAGAGGAAGCGATATCACTCCATGTGAGTGTAGGTTCAAGATTTGTAGAGACTGCTTCATAGATGCACAAAAAGAATCTGGTTTGTGTCCCGGTTGCAAGGAGCCGTATAAAGTGGGGGAGTACGAGGAAGACCTCCATGATTATCCTACCAATGGGACATTGGCATCATTACCAGCACCGAACGGTTCAAAAAATTCAAACATGTCGGTTATGAAAAGAAATCAGAATGGAGAATTTGATCATAATAAGTGGTTGTTCGAGACTCATGGTACCTACGGAGTTGGTAATGCTTATTGGCCTCAAGATGAGTTCGATGAAGATGGTGATGAAGCGGTAAAGGCAGGAATGCTTGATCACGAGAAGCCGTGGAAACCTTTGAGCCGTATAACACCAATTCCGTCAAGCATTATGAGTCCTTACAGGTGTCTTATTGCTGTTCGATTAGTAGTGTTGGGGTTCTTTTTACACTGGAGAGTGACACATCCAAATAATGATGCAATATGGTTGTGGCTCATGTCAATTACTTGTGAGATATGGTTTGGCTTTTCATGGATTCTAGATCAAGTTCCCAAGCTATGTCCTGTGAATCGTTCCACTGATCTTGCTGTGCTTTTTGAAAAGTTTGATAGTCCATCCCCATCAAACCCAACAGGGAGATCTGATCTACCTGGTCTGGACCTCTTTGTGTCCACTGCAGATCCTGAGAAGGAGCCACCTCTTACAACTGCTAATACCATTCTTTCTATATTAGCGGTTGATTATCCTGTCGAGAAGCTTGCATGTTACATTTCCGATGATGGAGGTGCTCTGTTGACTTTTGAAGCCATGGCTGAGGCTGCTAGTTTTGCCGATTTATGGGTTCCCTTTTGTCGAAAACACAAAATTGAGCCGAGAAATCCAGATAGTTACTTCAGCTTGAAAGTTGACCCCACCAAGAACAAAAGCAGAACAGATTTTGTGAAAGACAGAAGGAGAGTAAAGAGGGAGTATGATGAATTCAAGGTACGGATAAATGGCCTTCCAGATTCCATCAGGAGAAGATCTGATGCCTTTAATGCGAGAGAGGAGATGAAGATGATGAAACATATGAAGGAGAGTGGGGCTGACCCTACCGACACTGTCAAAGTGTTAAAAGCCACATGGATGGCTGATGGCACCCACTGGCCTGGTACTTGGGCAAATCCTTCTAGTGAACACTCTAAAGGTGATCATGCAGGAATACTTCAGGTGATGTTAAAGCCACCGAGTCCCGATCCACTGTTGGGAAGTGCAGATGACAAGATTGTAGACTTCTCCGAAGTAGATACAAGGCTGCCAATGTTTGTGTATGTTTCTCGAGAGAAACGTCCTGGTTACGATCACAATAAGAAAGCCGGTGCCATGAATGCATTGGTTCGAGCTTCTGCAATTTTGTCGAACGGACCGTTCATTCTCAACCTCGACTGTGACCATTACATCTACAACTGCAAGGCAGTGAGAGAAGGTATGTGCTTCATGATGGATAGAGGTGGCGAGGACATATGCTACATCCAGTTTCCTCAGAGATTCGAAGGCATCGACCCCTCAGATCGTTATGCCAATCACAACACCGTGTTTTTTGACGGAAACATGCGAGCCCTCGATGGTCTTCAAGGTCCGATGTACGTGGGAACCGGATGCATGTTCAGGAGGTTTGCTCTATACGCATTCGACCCTCCAATGGTGGACAAGATGGACGAAAAGAAGGATGTTAAGAATGGTGAAGACTCTGAAACACCGGCCTTGGATGCTAGCGAGTTTGATTCAAATCTGGATGTGAACTTATTGCCTAAGAGGTTTGGTAATTCAACCATGTTGTCTGAGAGCATACCTGTTGCAGAGTTCCAAGGTCGTCCTTTAGCGGATCACCCCGCGATCAAGTATGGACGCCCACCCGGTGTCCTTAGGGCCCCTCGCCAGCCACTGGATGCAACTACTGTGGCCGAAGCTGTATCTGTCATTTCTTGTTGGTACGAGGACAAGACAGAATGGGGAGACAGAGTGGGTTGGATTTATGGGTCTGTGACAGAAGATGTGGTGACAGGGTACCGCATGCACAACCGCGGATGGCGTTCAGTATACTGCATAACAAAGCGAGATGCATTCCGTGGATCAGCACCGATTAACCTGACTGATCGACTGCACCAGGTGCTGAGATGGGCCACAGGCTCTGTGGAAATCTTCTTCTCAAAGAACAACGCTTTCCTTGCCAGTAAGCGCCTTAAGATTCTCCAACGTCTGGCATACCTCAATGTCGGAATCTACCCCTTCACCTCCCTATTTCTCGTTGTGTATTGCTTCCTCCCGGCGCTCTCTCTATTCTCAGGATTCTTCATCGTCCAAACTCTCAGCATCGCCTTCTTAGTCTACCTGCTCCTCATCACCGTATGCTTGGTGGCATTGGCTGTTCTTGAGGTTAGATGGTCCGGTGTGGAGTTAGAGCAATGGTGGAGAAATGAACAGTTTTGGCTTATTTCTGGAACCAGTGCTCACTTGGCTGCTGTGGTGCAAGGACTCCTCAAGGTGCTTGCAGGGATTGAGATTTCCTTCACTCTGACAACTAAGTCAGCAGGAGATGATGATGAAGACATATACGCAGATTTGTACATAGTGAAATGGAGCTCCTTGATGGTTCCACCCATTGTGATTGCTATGATGAACATCATCGGCATTGTAGTGTCGTTTTCAAGAACAATTTACAGTGCAAACCCACAATGGAGCAAGTTCATCGGAGGAGCATTCTTCAGTTTTTGGGTGCTTGCTCATCTCTACCCTTTTGCAAAAGGGTTGATGGGGAGGAGAGGCAAGACACCCACCATCGTCTATGTGTGGTCTGGTCTCATTGCAATCACACTCTCTCTGCTTTGGGTTGCCATTAATCCTCCCCAAGGTGGCGATGGACAAGGTGTGAAACCTGTTGCTTCTTTGGGTAGAAGATTCAGGAGTTTAGCTACCTTGGATCACTACAAAGCTGAAGAATTTGTGGGGACGCTATTGATTGACTTGGTGCAACCAATTATGTCATCCAACAGTTCTTTGAAAGGGGAATTGACAAAGAAGACTCCATTTTTGGGGTTGAGACGATGGGTTTTGATTGGAGTAGGTGTTGGTGCATTTATAGTGCTTATTCTTTGTATATTGTCAATATGGGTGATGTTTCGGAGAAAGTCTAAGAGATCTTTGGACAAGTATTCTGTATCCCAAATACCAAATGTCTCAAAAGATATCGACGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTCCAACCAGAAAATGTGCTTATGCCTGTTCATAACATGACAAGTGATAAGAATTCAGATAATATATCAGTTCATTTGGTTAACAGCAAATCTGGGGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCAGCTGAAGAAGGAAACTCCGGGAATGTTAAGAAACAATCCACATTGTCACATGGAGGGTTGGCTACTGCCTCTCCATTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTCAGAGATCTGGAAATGGCAACCAAACGATTCTCAGCTGAGAACATTATTGGTGAGGGTGGATATGGGGTTGTTTACAAGGGAATACTGATTAATGGAATTGAGGTGGCAGTGAAGAAACTTCTTAACAACTTGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAGTGGTTACATGGAGACATGCACCAACATGGGACACTTACTTGGGAGGCCCGCTTGAAAGTTATACTTGGCACAGCCAAAGCTTATGTGGCCCCAGAATACGCGAACAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCTCGTCCTGCCAATGAGGTTAATCTAGTTGAATGGCTCAAAATGATGGTAGGAACAAGAAGGGCTGAAGAAGTAGTGGACTCAAACCTTGAAGTTAAACCACCTTTGCGTGCTTTAAAGCGCACTCTTCTGGTTGCACTTAGATGTATTGATCCTGATGCTGACAAGAGGCCCAAAATGAGTCAAGTTGTGAGAATGCTCGAAGCTGATGAATATCCATACCGAGAGGATAGAAGAAACAGAAAGAGTGGCACTGTCAACATGGAAATTGAAACTGTGAAGGATATTTCGGGTCCATCTGATGCTGAAAGGATGGGGCATACTGAAACAACTCAAGGATAG 4704 0.4496 MSSLNRQPSKKSLRNSGGLSGGPQVGSTSGGPSVKFARRTSSGRYVSLSKDDIDMSSDLSGDYMNYTVHIPPTPDNQPMDTSIAMKAEEQYVSNSLFTGGFNSVTRAHLMDKVIDSEVTHPQMAGSKGSACSICDGRVMRDERGSDITPCECRFKICRDCFIDAQKESGLCPGCKEPYKVGEYEEDLHDYPTNGTLASLPAPNGSKNSNMSVMKRNQNGEFDHNKWLFETHGTYGVGNAYWPQDEFDEDGDEAVKAGMLDHEKPWKPLSRITPIPSSIMSPYRCLIAVRLVVLGFFLHWRVTHPNNDAIWLWLMSITCEIWFGFSWILDQVPKLCPVNRSTDLAVLFEKFDSPSPSNPTGRSDLPGLDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCRKHKIEPRNPDSYFSLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAFNAREEMKMMKHMKESGADPTDTVKVLKATWMADGTHWPGTWANPSSEHSKGDHAGILQVMLKPPSPDPLLGSADDKIVDFSEVDTRLPMFVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRGGEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYAFDPPMVDKMDEKKDVKNGEDSETPALDASEFDSNLDVNLLPKRFGNSTMLSESIPVAEFQGRPLADHPAIKYGRPPGVLRAPRQPLDATTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSKNNAFLASKRLKILQRLAYLNVGIYPFTSLFLVVYCFLPALSLFSGFFIVQTLSIAFLVYLLLITVCLVALAVLEVRWSGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVLAGIEISFTLTTKSAGDDDEDIYADLYIVKWSSLMVPPIVIAMMNIIGIVVSFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVYVWSGLIAITLSLLWVAINPPQGGDGQGVKPVASLGRRFRSLATLDHYKAEEFVGTLLIDLVQPIMSSNSSLKGELTKKTPFLGLRRWVLIGVGVGAFIVLILCILSIWVMFRRKSKRSLDKYSVSQIPNVSKDIDVDKVGVQSSHVQPENVLMPVHNMTSDKNSDNISVHLVNSKSGDPDNISQCSSIYHHERGFSSMSAEEGNSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATKRFSAENIIGEGGYGVVYKGILINGIEVAVKKLLNNLLLVYEYVNNGNLEQWLHGDMHQHGTLTWEARLKVILGTAKAYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRAEEVVDSNLEVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPYREDRRNRKSGTVNMEIETVKDISGPSDAERMGHTETTQG 1567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01261 1567 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 194 IPR013083 -
Vian7g01261 1567 Pfam RING/Ubox like zinc-binding domain 131 179 - -
Vian7g01261 1567 FunFam Cellulose synthase-like protein D3 114 193 - -
Vian7g01261 1567 Gene3D Transferase(Phosphotransferase) domain 1 1412 1538 - -
Vian7g01261 1567 SUPERFAMILY Protein kinase-like (PK-like) 1326 1523 IPR011009 -
Vian7g01261 1567 ProSitePatterns Protein kinases ATP-binding region signature. 1348 1371 IPR017441 GO:0005524
Vian7g01261 1567 Pfam Protein tyrosine and serine/threonine kinase 1417 1521 IPR001245 GO:0004672|GO:0006468
Vian7g01261 1567 FunFam Putative receptor-like serine/threonine-protein kinase 1416 1536 - -
Vian7g01261 1567 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 564 710 IPR029044 -
Vian7g01261 1567 MobiDBLite consensus disorder prediction 1 41 - -
Vian7g01261 1567 MobiDBLite consensus disorder prediction 1529 1567 - -
Vian7g01261 1567 SUPERFAMILY Nucleotide-diphospho-sugar transferases 382 917 IPR029044 -
Vian7g01261 1567 Pfam Cellulose synthase 714 1110 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian7g01261 1567 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 266 1093 - -
Vian7g01261 1567 FunFam Cellulose synthase-like protein D4 568 713 - -
Vian7g01261 1567 SUPERFAMILY RING/U-box 120 184 - -
Vian7g01261 1567 Gene3D Phosphorylase Kinase; domain 1 1319 1387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01261 Vian-Chr7 20751206 20761097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01261 1 1109 Glycosyltransferase AT4G38190 80.914 0.0 1899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Vian7g01261 Cellulose_synt 2.4e-191 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01261 K20924 - gmx:100778982 2075.83