Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01260 ATGGCGAATGAGAAGGATCGTTTTTATGACCCTTTTCATTACAACCACCACGAACACCAACTCAACCACTCTTCAAACTTTCCATTCTTTAGGGATAACAACTCTACACCAATTGCCTCACAAAACTTTCAAGGGTTTGATCATCATCATCATAATCCTTCTCATCAACGCACCACTTTCACTGACTGCTTACATGGTTCCATGGATTACAACACCCTCTCCAGAGCCTTTGACATGTCTTGCTCATCTTCTGAAGTGCTCTCTTCCATTGATGAAAACCCCAAGAAGCCTAGTGCAGGAGACTCCGCAGGGATCAGTGGAAACCAGTCAACACCCAATTCATCGGTTTCCTCGTCTTCCAATGAAGCTGAAGCACTCATAGAAGAAGACTCCACCAAAAGCCAGAAGAAAGATAAACAGCCAAAAGGGTGCGAAGATGAAGAAGAAAAGCCTAAGAAAGAGAACAAGCCTAAAAAGAAAGAGAAAAAGCCAAGAGAGCCTCGTTTTGCCTTCTTGACTAAAAGTGAGATAGACAACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAACAGTCCCTACCCAAGGAGCTACTATAGATGCACCAGTCAGAAGTGCAGCGTAAAGAAAAGGGTGGAAAGATCATTCCAAGATCCATCAATTGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTAAGGGGCAGTGCTGCCACCATGTTGTCAGCACCTCCTTTTTTTGGTTCCTCTTACATGGGCTCAAGCTTACCTCAAGATTTTCTTGCTCAGTTTCTTCCAAGTTATACCCAAAGTGATCATCAAAATCCAATGTTCAACCAAAACCTTTCCAACAATCTCCATCTCCAGCCACAACAACATCAGCAGCACCAGTTCCAACTCCCTCGTGACTATGGTTTGCTGCAAGACCTGCTGCCATCATCATTCCCAGGCAAACAAGAGCCTTGA 996 0.4398 MANEKDRFYDPFHYNHHEHQLNHSSNFPFFRDNNSTPIASQNFQGFDHHHHNPSHQRTTFTDCLHGSMDYNTLSRAFDMSCSSSEVLSSIDENPKKPSAGDSAGISGNQSTPNSSVSSSSNEAEALIEEDSTKSQKKDKQPKGCEDEEEKPKKENKPKKKEKKPREPRFAFLTKSEIDNLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPSIVITTYEGQHNHHCPATLRGSAATMLSAPPFFGSSYMGSSLPQDFLAQFLPSYTQSDHQNPMFNQNLSNNLHLQPQQHQQHQFQLPRDYGLLQDLLPSSFPGKQEP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01260 331 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 295 IPR044810 GO:0003700
Vian7g01260 331 SMART WRKY_cls 180 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g01260 331 SUPERFAMILY WRKY DNA-binding domain 173 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian7g01260 331 Gene3D WRKY domain 150 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian7g01260 331 MobiDBLite consensus disorder prediction 102 125 - -
Vian7g01260 331 MobiDBLite consensus disorder prediction 88 170 - -
Vian7g01260 331 ProSiteProfiles WRKY domain profile. 175 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g01260 331 Pfam WRKY DNA -binding domain 181 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g01260 331 MobiDBLite consensus disorder prediction 126 170 - -
Vian7g01260 331 FunFam WRKY transcription factor 57 166 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01260 Vian-Chr7 20741099 20742947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01260 1 331 WRKY Transcription Factor Family AT4G18170 42.319 2.97e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian7g01260 WRKY 8.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01260 - - gmx:100790175 474.167