Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01254 ATGATCCCACAACAAGAACCCGATTTAAATCTCAATCACCTTAAGCTATATTACGGTTCGTTACTTCCCGTTTTTTCTGTTCCTTTATTCTCCGTGTCAAAATGGGTGTCTTATGGCAACGATGCGAAGCACCCTGGTTGTGATCAATCCTATATGGGACGGAGAGAGTTTTCCTTCACTCTGGTGGATGATATTTATCTGCGTTTCCAATCTTTCAACAATGCACACGAGCTCGAAAATTCAGTCAAAGAGAAGTCCCCTGTTAAGATAGATATTGGGCCTGTCTACTCTGTTGATCCTGCAAAAAGGTATGCCTATGCGCAGAGTGAAAATAATGTCTTTGCCCCAGTTGAGAGGGAGTTGATTTTCGATATAGATATGACAGACTATGATGATGTTAGATACTGCTGCTCAGGTGCTGACGTTTGTTTGGTTTGCTGGCCGTTAATGACTATAGCAATCAAAGTGATTGATACTGCCTTGAGAGATGACTTTGGTTTCAAGCACGTTCTCTGGGTATACAGTGGACGCAGAGGTGTTCATTGCTGGGTCTGTGATGGGAAGGCAAGAAGGTTGTCTAATGAGCAGAGAGGTGCTATTGCTGACTATTTTCGTGTCTACAAGGGCAATGAAAATAGTCATAAGAAGGTTTCTTTGACGGGTGCTGCCCTTCATCCTTTCTTGGCGACATCATACACTAACGTTCTCAAAGACTATTTCGAGAAAAATCTGCTTACCGGACAAAATTTACTTGCTACTGAGGAGAGATATGAGAAAATTCTAAGCATGATTCCTGATGAATCTATTGCTTCTGAACTTCGGGGGAGATGGCACGATAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATCAATGTTGTTCGATGGGAACAACTCAAACAGTTGCTGCAATCTGGAAAACATAAGGCGCAAGGGCTGCGCCGATGTGTTGAAGAGATTGTGTTCTCCTTTACATATCCGAGGCTTGATATGGAGGTTTCTAAACATATGAATCATTTGCTCAAGGCTCCATTCTGTGTACATCCCAAAACAGGTCGTGTTTGTGTCCCAATTGATCCAAATCGGTGCGACGAATTTGATCCTACTACAGTACCCACCCTTTCACAGCTGATAGAAGAGCTTAATTACGAAGGCTCAAGATCTGATGTTGATGGTGGTAAGTTAATTACACTCGAACAATCGAAATTTCCTTTTGTAAAATCTTCACATTGCCGTCACATTGTGTCTTGGACTCTTCGAGTTCAGGTTGTGTACATTAATATGCTCCCTCTAATGCTAATTGCAACTTGGAAAGTGGTTTAA 1320 0.4212 MIPQQEPDLNLNHLKLYYGSLLPVFSVPLFSVSKWVSYGNDAKHPGCDQSYMGRREFSFTLVDDIYLRFQSFNNAHELENSVKEKSPVKIDIGPVYSVDPAKRYAYAQSENNVFAPVERELIFDIDMTDYDDVRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHVLWVYSGRRGVHCWVCDGKARRLSNEQRGAIADYFRVYKGNENSHKKVSLTGAALHPFLATSYTNVLKDYFEKNLLTGQNLLATEERYEKILSMIPDESIASELRGRWHDSRRSSSAKEDINVVRWEQLKQLLQSGKHKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTLSQLIEELNYEGSRSDVDGGKLITLEQSKFPFVKSSHCRHIVSWTLRVQVVYINMLPLMLIATWKVV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01254 439 PANTHER DNA PRIMASE SMALL SUBUNIT 6 388 - -
Vian7g01254 439 SUPERFAMILY Prim-pol domain 12 381 - -
Vian7g01254 439 FunFam DNA primase 1 416 - -
Vian7g01254 439 Gene3D DNA primase, PRIM domain 2 415 - -
Vian7g01254 439 Pfam DNA primase small subunit 123 358 IPR002755 GO:0003896|GO:0006269
Vian7g01254 439 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 49 378 IPR014052 GO:0003896|GO:0006269
Vian7g01254 439 CDD AE_Prim_S 43 367 IPR014052 GO:0003896|GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01254 3 423 Core DNA Replication Machinery Family AT5G41880 62.645 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01254 K02684 - gmx:100780574 735.717