Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01229 ATGATTTGCACGGTGAAACAGCCCGCCATATCGATCAGAGCCTCTGATGTTTTGCTAAGAAAGGGTTCAACTTTAGCCTCAGCTAAGTCATGTTCCCTTGTTGTCCCTTCTTCCCATCCAAGGGAAAAGACTGTGAGATCTCTTTTGTCAGTGCAAAAGCCACTGCACCTTTCATGTGTGGGGTTGGGGAATTTTGTTAGGTCTTCGGTGAGGCGTGAACGTGGTGATTTGGGGACATGTAAGGCCTATGAGGCTGAGAGACCGGAGGTGGAAGGGGCTGATCCATCGGAGGCTGCTAAGAAGGTGAAAATTGGTATATACTTTGCAACTTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAATAAGAAGGTGCTGAATGCGTACCCCTACCCTTGGCTTACCTCAACACTCTCCCTTGCATGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACCAGGATAGCGGAGCCTCCCAAGACCGATCTTGAGTTCTGGAAGACTTTGTTACCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCAACTGTTAGCATGTCAAAAGTTGCAGTCTCCTTCACCCACATCATAAAGAGTGGTGAACCAGCTTTCAGTGTTCTTGTTTCCAGATTTCTTCTGGGTGAGACCTTCCCGGTGCCAGTCTATCTTTCCTTAATTCCTATCATTGGTGGATGTGCACTTGCAGCTGTTACTGAGCTCAACTTCAACATGATTGGTTTTATGGGGGCTATGATATCGAATTTGGCATTCGTGTTCCGTAACATATTTTCAAAGAAGGGCATGAAAGGAAAGGCTGTTAGTGGAATGAACTACTATGCGTGTTTATCTATGTTGTCTCTTGTAATACTCACACCTTTTGCGATTGCTGTGGAGGGACCACAGATGTGGGCAATTGGATGGCAAGCAGCTCTCTCTCAAATTGGACCTCAATTTATATGGTGGGTGGCAGCTCAGAGTATATTCTATCACCTGTATAATCAGGTGTCGTACATGTCTCTGGATGAGATATCTCCTTTGACATTTAGCATTGGAAACACCATGAAACGCATATCTGTTATAGTTTCTTCAATCATCATCTTCCACACACCAGTTCAGCCTGTTAACGCTCTTGGAGCTGCTATTGCCATCCTCGGAACCTTCTTGTATTCACAGTGTAATTGTGAAACAGCGACATGCTACTCTGTATTGGAACTTGACCTTGGAATAGCATCCTTGAAGATAAAGAAGGAGGAAGCAGCAATGTGA 1269 0.4507 MICTVKQPAISIRASDVLLRKGSTLASAKSCSLVVPSSHPREKTVRSLLSVQKPLHLSCVGLGNFVRSSVRRERGDLGTCKAYEAERPEVEGADPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPKTDLEFWKTLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSMLSLVILTPFAIAVEGPQMWAIGWQAALSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQCNCETATCYSVLELDLGIASLKIKKEEAAM 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01229 422 PANTHER SOLUTE CARRIER FAMILY 35 103 394 - -
Vian7g01229 422 Pfam Triose-phosphate Transporter family 103 391 IPR004853 -
Vian7g01229 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 238 - -
Vian7g01229 422 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 103 395 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01229 Vian-Chr7 20492557 20495858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01229 33 400 Antiporters AT1G61800 76.944 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01229 K15283 - gmx:100787351 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01447 6 32028801 32030605 Vian7g01229 7 20492557 20495858 ECH
Vian7g01229 7 20492557 20495858 Vian7g01229 7 20492557 20495858 ECH
Vian6g00135 6 3611693 3615395 Vian7g01229 7 20492557 20495858 PCT