Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01184 ATGGCGTCTGTGGAACATCTCGTCCTCGAACTCAGCAATCCTGATCTCCGAGAAAACGCACTCCATGAACTCTCCAAGGATCTTGCTCCATTACTGTGGAATTCTTTTGGTACTATGGCAGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTATTTCCCCGCCAAACCTTACTCCAGCACAATCAAACCGAGTCTGCAATGCTCTTGCCCTTCTTCAGTGTGTGGCGTCTCACCTTGATACAAGGATGCAATTCCTCAACGCTCATATACCTCTTTATCTGTATCCCTTCCTTAATACAACAAGTAAGTCCAGGCCATTTGAGTATTTGAGGCTTACCAGTCTAGGAGTCATTGGTGCCTTGGTAAAGGTTGATGATACAGAAGTTATAAGTTTTCTTCTTTCAACAGAGATTATTCCGCTGTGCTTGCGCAGTATGGAAATGGGCACAGAACGCTTTTATGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAACTCTTGTTGAGCAACCGTCATGCCGTCTTTTGAAGCATATCATTCGTTGCTATCTTCGCCTGTCAGATAATCAGAGTGCTTGCGAAGCTTTAAGAACCTGTCTCCCAGACATGTTAAGAGACGCTACATTCAGTAGTTGCCTTCGTGAGGACCCAACAGCAAGGCGGTGGCTACAGCAGTTGCTTCACAATATCGGAGTCAATCGAGTTCCTACACTTCAAGGTGGAGGAGGATTTGATCATATGATGGTGTCGTGA 756 0.4524 MASVEHLVLELSNPDLRENALHELSKDLAPLLWNSFGTMAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHLDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRSMEMGTERFYAVGRVLGNMVATLVEQPSCRLLKHIIRCYLRLSDNQSACEALRTCLPDMLRDATFSSCLREDPTARRWLQQLLHNIGVNRVPTLQGGGGFDHMMVS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01184 251 SUPERFAMILY ARM repeat 14 211 IPR016024 -
Vian7g01184 251 Gene3D - 1 151 IPR011989 -
Vian7g01184 251 Gene3D - 152 235 IPR011989 -
Vian7g01184 251 Pfam Cell differentiation family, Rcd1-like 7 152 - -
Vian7g01184 251 PANTHER UNCHARACTERIZED 3 152 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01184 Vian-Chr7 20141628 20148263 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Vian7g01184 Rcd1 8.4e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01184 K12606 - gmx:100801266 459.914