Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01153 ATGGCATCTTCTTCAAACTCATGGATGAAGGAATATAATGAAGCACTGAAACTTGCTGACGATATCAGTGGTATGATTTCTGAGCAGAGTTCATTTCCTGCATCTGGACCAGAAATCCAGCGTCATTCATCTGCTATAAGGAGGAAGATTACTATATTGGGTACCCGGCTTGATAGCTTGCAATCTCTATTGTCCAAGCTTCCTGGAAAGCAGCCGCCCATATCTGAGAAGGAGATGAATCGTCGGAAGGACATGCTCGCAAGTTTGAGATCAAAAGTTAATCAAATGGCTTCCACATTGAACATGTCAAACTTTTCAAATAGAGATAGTTTGCTTGGACCAGAAGGAAAACCAGATGCTATGGCCAGAACTGTTGGCCTGGACAACAATGGACTTGTTGGATTTCAACGGCAAATAATGAAAGAACAAGATGAGGGCCTTGAGCAATTGGAAGAGACTATAGCAAGCACAAAACATATTGCTTTGGCAGTGAATGAAGAGCTGAGTCTGCACACCAGACTCATTGATGACTTGGATCAGCATGTAGATGTCACAGATTCGAGGCTTAGGCGGGTGCAGAAGAACTTAGCAATTTTAAACAAGCGAACCAGGGGTGGTTGTTCCTGCCTGTACATGCTTTTATCAGTTGTTGGTATAGTGTTTTTGGTTGTTGTCATTTGGCTATTGGTCAAATATTTGTGA 702 0.4231 MASSSNSWMKEYNEALKLADDISGMISEQSSFPASGPEIQRHSSAIRRKITILGTRLDSLQSLLSKLPGKQPPISEKEMNRRKDMLASLRSKVNQMASTLNMSNFSNRDSLLGPEGKPDAMARTVGLDNNGLVGFQRQIMKEQDEGLEQLEETIASTKHIALAVNEELSLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTRGGCSCLYMLLSVVGIVFLVVVIWLLVKYL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01153 233 SMART tSNARE_6 132 199 IPR000727 -
Vian7g01153 233 FunFam syntaxin-51 isoform X2 139 201 - -
Vian7g01153 233 Coils Coil 147 167 - -
Vian7g01153 233 CDD SNARE_Qc 140 197 - -
Vian7g01153 233 PANTHER SYNTAXIN 38 221 IPR045242 -
Vian7g01153 233 SUPERFAMILY SNARE fusion complex 128 198 - -
Vian7g01153 233 Pfam SNARE domain 174 225 IPR000727 -
Vian7g01153 233 Gene3D - 139 201 - -
Vian7g01153 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01153 Vian-Chr7 19821588 19822887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01153 1 233 SNARE and Associated Proteins AT1G16240 72.222 2.05e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01153 K08503 - gmx:100782666 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01153 7 19821588 19822887 Vian7g01153 7 19821588 19822887 ECH