Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01146 ATGGAGATGGATAGGTATACCAGTCAGCGGTGGCGACCTACTGACGATCAGGTCAGAATGATGACCAATATTTACAATTACGGGGTCACACATCCCAGCAGAGCGCAAGTCGTCGAAATTCCGTCTCGACTAAGGGTTTTCGCAGATGTCAGCGAATACAATGTGTACTGCTGGTTTAACAACCACGGCAATCGGGTCAGGCGCTGGCAAGCAGAGATAGACCCTACCGGCACTCAGTTCTCACAACTGCCGCTATACATGTATGAATACGACTGGGTGATCATGCGAGCGCCGAGGCTACTGGACTTGTTCCCCGTTCCGATCATCATTGACGACGACAGGGACGGACGACAAATCGCTCCACCCATGCTTCTCACCTTCCGGACCAGAGCTCCCTCGACGGAGCTCTCTCTCAGACCACCGCAACCAGCCCGGGAATTTTTTCGCTGA 450 0.5333 MEMDRYTSQRWRPTDDQVRMMTNIYNYGVTHPSRAQVVEIPSRLRVFADVSEYNVYCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYDWVIMRAPRLLDLFPVPIIIDDDRDGRQIAPPMLLTFRTRAPSTELSLRPPQPAREFFR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01146 149 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 3 68 IPR044555 GO:0003700|GO:0099402
Vian7g01146 149 Pfam Homeodomain 8 68 IPR001356 GO:0003677
Vian7g01146 149 SUPERFAMILY Homeodomain-like 9 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01146 Vian-Chr7 19726048 19726590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01146 7 72 Wox Gene Family AT5G59340 39.394 3.42e-13 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian7g01146 Homeodomain 2.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01146 - K22984 vum:124821070 285.804