Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01135 ATGCCGTTTGTTAACCCTGACCCTTCAGACAAAGATTCTGAACCATTTGTTGAGACTGATCCAACTGGTCGCTATGGTAGATACAGTGAGTTGCTTGGTTGTGGTGCTGTGAAAAAAGTGTACCGTGCATTTGATCAGGAAGAAGGAATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAATTTCTGTGATGACCCTACCATGGTGGATAGGCTATACTCTGAAGTGAGGTTGCTCAGAAGCTTGACCGACAAAAACATCATCGCACTTTACAGTGTCTGGAGGGATGACCAGCGCAACACTCTGAATTTCATCACTGAGGTTTGTACCAGTGGTGATTTGAGGGAGTATAGGAAGAGGCACAGGCATGTTTCCATGAAGGCCCTCAAGAAGTGGTCTAAGCAGATTTTAAAAGGGCTGAACTATCTGCACTTGCATGATCCCTGCATCATTCACAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAGGAGCCATTGTGCTCACACGATTCTTGGGACACCAGAATTCATGGCTCCGGAGTTATATGATGAAGACTACACTGAGTTGGTGGACATTTATTCATTTGGGATGTGTTTACTGGAAATGGTGACACTGGAGATTCCTTACAGTGAATGTGACAATGTTGCAAAGATATACAAGAAGGTGTGCTCTGGAGTTAGACCTGCAGCCCTGAACAAGGTGAAAGATCCAGAGGTGAAGGCCTTCATTGAGAAGTGCCTTGCTCAGCCAAGAGCTAGACCTTCTGCAGCTGACCTTCTCGAAGATCCCTTCTTTGATGAGATTATTGATGATGACGAAAATGATGACTGTTCTTCTTCTCACCAGTAA 906 0.4514 MPFVNPDPSDKDSEPFVETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPTMVDRLYSEVRLLRSLTDKNIIALYSVWRDDQRNTLNFITEVCTSGDLREYRKRHRHVSMKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGRSHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCLLEMVTLEIPYSECDNVAKIYKKVCSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAADLLEDPFFDEIIDDDENDDCSSSHQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01135 301 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Vian7g01135 301 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01135 301 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 287 - -
Vian7g01135 301 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Vian7g01135 301 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Vian7g01135 301 CDD STKc_WNK 24 284 - -
Vian7g01135 301 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Vian7g01135 301 SUPERFAMILY Protein kinase-like (PK-like) 20 290 IPR011009 -
Vian7g01135 301 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01135 301 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01135 Vian-Chr7 19569789 19571385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01135 5 288 MAP Kinase Kinase Kinase AT5G55560 80.282 5.43e-179 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vian7g01135 Pkinase 4.2e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01135 7 19569789 19571385 Vian7g01135 7 19569789 19571385 ECH
Vian6g00448 6 18766771 18768466 Vian7g01135 7 19569789 19571385 PCT