Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01131 ATGGCTGCTTCTGTGTCTCTATATCCCTATAAACCCCTGCTATACTTTTCCACTCCTTCCTGTTTTCAGTCTCAATTTCGGAACTTGGAGAGAGGGCATTTGGGTTCTGCAAGGTTGAAGAGTATAGTGAAACTTGCAGCACATTCAAATCCGAAAATTCTCAAGACCAACAGGAAGTCAAAGTATGGAGAGGCACTGTCGCTGTACGATAGTGATGAAGACGATGAAGAAACTGACGAGGAGGAGGACGACGAAGATGATGATGATTGGCTTTCTGATGAGGAATTTGCTGAGCCTGCTAAATTTGATGTTAGGAACAAGAGATTGAAGTCGAAGACAGTTAAAGGAAAGAATAAAGAGCAGGAGTGGGAGTGGGGTTTGAGATCTTTGGACAACGAACATAGCATTAGATTGCCTAGAAGTGAGAGAGTGGCATCCTTACAACGAAATGAGAGTGGAAAGGTACCAAATGGTGATACGGTTAGTAGAAATGTAAAGAACAAAAAATATCCGCGGTTGTCCGAAGAGATTCCTTTGGACTTGAAATGGTTACCACTTCTTGATTACCTGAGCACCTTTGGAATGAAGGAGTCACACTTTATCCAAATATATGAGAGGCACATGCAAGCACTTCAAATTAATGTTGGTTCCGCACAGGAAAGGTTAGAATACTTAATGAGTGTTGGTGTTAAACATAGAGATGTAAGAAGAATCCTTTTGAGGCAGCCACAAATTCTTGAGTATACAGTGGAGAACAATTTGAAGTCTCGTGTTGCATTCTTGAAGGGCCTGGGCATACCGAATTCTAGAATGGGGCAAATCATTGCTGCTGCTCCGTCTTTGTTTTCTTACAGTGTTGAGAATTCATTAAAACCTACAGTTAGATATTTAGTTGAGGAAGTAGGCATCAAGGAAAAAGATTTGGGTAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAAAGAATTGACATTTCATGGAATATGCGTTATATGTTTCTTACCAAGGAGTTGGGTGCACCCAGGGATAACATTGTGAAGATGGTGACAAAACATCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCTTAAGGAGCATAGGAATGAAAAATTCAGATATCTTGAAAGTATTGACTAGCCTTACGCAGGTGCTATCTCTGTCATTGGAGGAAAATCTAAAGCCCAAATATTTGTACTTGGTAAATGAACTTAACAATGAGGTGCAATCCTTGACCAAGTATCCAATGTATCTTAGTTTATCCTTGGACCAGAGAATTCGTCCTCGTCATAGGTTCTTAGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCCCTTGGATCTCTTGTACCAACTGATGAATGTTTTTGCGAACAGTGGGCTGGAACAAGTTTGGATAAATATTTGGCATTCCGTCAGAGATTATTACTTCAAAAGTTTGCTAAGAAATATGAAAGAAAAATGTGA 1488 0.3985 MAASVSLYPYKPLLYFSTPSCFQSQFRNLERGHLGSARLKSIVKLAAHSNPKILKTNRKSKYGEALSLYDSDEDDEETDEEEDDEDDDDWLSDEEFAEPAKFDVRNKRLKSKTVKGKNKEQEWEWGLRSLDNEHSIRLPRSERVASLQRNESGKVPNGDTVSRNVKNKKYPRLSEEIPLDLKWLPLLDYLSTFGMKESHFIQIYERHMQALQINVGSAQERLEYLMSVGVKHRDVRRILLRQPQILEYTVENNLKSRVAFLKGLGIPNSRMGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNMRYMFLTKELGAPRDNIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCEQWAGTSLDKYLAFRQRLLLQKFAKKYERKM 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01131 495 PANTHER CGI-12 PROTEIN-RELATED 184 467 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 FunFam Transcription termination factor MTERF9, chloroplastic 247 482 - -
Vian7g01131 495 Gene3D Transcription termination factor 3, mitochondrial 244 482 IPR038538 -
Vian7g01131 495 Pfam mTERF 188 262 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 Pfam mTERF 250 442 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 MobiDBLite consensus disorder prediction 145 164 - -
Vian7g01131 495 MobiDBLite consensus disorder prediction 69 92 - -
Vian7g01131 495 MobiDBLite consensus disorder prediction 141 166 - -
Vian7g01131 495 Coils Coil 201 221 - -
Vian7g01131 495 SMART mt_12 382 414 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 SMART mt_12 415 446 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 SMART mt_12 236 267 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 SMART mt_12 272 304 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 SMART mt_12 346 377 IPR003690 GO:0003690|GO:0006355
Vian7g01131 495 MobiDBLite consensus disorder prediction 65 92 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian7g01131 mTERF 1.9e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01131 K15032 - gmx:102660933 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01131 7 19521719 19523739 Vian7g01131 7 19521719 19523739 ECH