Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01127 ATGAAGGATTCCGCCGTTTATGCGCTTCACACTGCGTGCTTCACACTACGCTTTCTATCTAGAAAATCCAAGAAAGACAAAAAGTCTAAACCAAAGAATGATGTGCACAACCAGGTGACCCCTCTTCCTGAGCTAATTGCCGAGCCAACAAATGCAAGATCAATGTCCTTTGTTGGAACACACGAGTACTTGGCCCCAGAGATCATCAAGGGTGAAGGGCATGGAAGTGTTGTGGACTGGTGGACATTTGGGATATTCCTGTATGAGCTTCTGTTTGGTAGAACACCATTCAAAGGTCCTGCAAAGCGTGCAACTCTATTCAATGTAATTGGTGAGTCTCTAAGATTTCCAGAATCTCCAACTGTTAGCTTTGCTGCTAGAGATTTGATCAGAGGGTTGCTTGTGAAGGAGCCCTAG 417 0.4508 MKDSAVYALHTACFTLRFLSRKSKKDKKSKPKNDVHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSVVDWWTFGIFLYELLFGRTPFKGPAKRATLFNVIGESLRFPESPTVSFAARDLIRGLLVKEP 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01127 138 PANTHER FLIPPASE KINASE 1-RELATED 12 138 - -
Vian7g01127 138 Gene3D Transferase(Phosphotransferase) domain 1 51 138 - -
Vian7g01127 138 Pfam Protein kinase domain 54 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01127 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01127 138 SUPERFAMILY Protein kinase-like (PK-like) 51 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01127 Vian-Chr7 19450568 19453138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01127 11 138 AGC Kinase Gene Family AT5G47750 80.469 1.83e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vian7g01127 Pkinase 1.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01127 K08286 - vum:124836595 253.447